RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ACADVLP49748 655 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 SARNPP82979 210 aaKnown RBP11.7□□□□□ -0.54
HSPG2-206ENST00000439717 DAB2P98082 770 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 GPS1Q13098 491 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 PTPRCAPQ14761 206 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 NR0B2Q15466 257 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 TRIP13Q15645 432 aaPredicted RBP11.7□□□□□ -0.54
HSPG2-206ENST00000439717 SKIDA1Q1XH10 827 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 LDLRAP1Q5SW96 308 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 NLRP9Q7RTR0 991 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 ADGRG6Q86SQ4 1221 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 SLCO6A1Q86UG4 719 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 OR13C4Q8NGS5 318 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 ZNF398Q8TD17 642 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 PTCD2Q8WV60 388 aaKnown RBP11.7□□□□□ -0.54
HSPG2-206ENST00000439717 CAPZA3Q96KX2 299 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 NLE1Q9NVX2 485 aaPredicted RBP11.7□□□□□ -0.54
HSPG2-206ENST00000439717 ATXN10Q9UBB4 475 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 PCYOX1Q9UHG3 505 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 TMPRSS11EQ9UL52 423 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 RIMKLBQ9ULI2 386 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 GPSM3Q9Y4H4 160 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 KCTD3Q9Y597 815 aa11.7□□□□□ -0.54
HSPG2-206ENST00000439717 LY6G6EA0A0G2JKS1 128 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 AGAP14A8MT82 685 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 CCDC188H7C350 402 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 CHUKO15111 745 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 GRID2O43424 1007 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 UGT1A9O60656 530 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 RFPL3O75679 317 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 ZNF8P17098 575 aaPredicted RBP11.69□□□□□ -0.54
HSPG2-206ENST00000439717 UGT1A6P19224 532 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 UGT1A1P22309 533 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 UGT1A4P22310 534 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 UGT1A3P35503 534 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 UGT1A5P35504 534 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 GRIA1P42261 906 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 NPY2RP49146 381 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 XIAPP98170 497 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 CTBSQ01459 385 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 TMEM115Q12893 351 aaPredicted RBP11.69□□□□□ -0.54
HSPG2-206ENST00000439717 DNAJC3Q13217 504 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 NFATC2Q13469 925 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 GTF2H3Q13889 308 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 SEPT6Q14141 434 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 KCNJ11Q14654 390 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 PPP1R7Q15435 360 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 CERCAMQ5T4B2 595 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 ARMC3Q5W041 872 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 LRRC8BQ6P9F7 803 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 OGFOD3Q6PK18 319 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 SYT10Q6XYQ8 523 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 SYDE1Q6ZW31 735 aaPredicted RBP11.69□□□□□ -0.54
HSPG2-206ENST00000439717 MARK2Q7KZI7 788 aaKnown RBP11.69□□□□□ -0.54
HSPG2-206ENST00000439717 SNX20Q7Z614 316 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 NRROSQ86YC3 692 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 ARL10Q8N8L6 244 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 FAM46DQ8NEK8 389 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 DDHD1Q8NEL9 900 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 CCL4L1Q8NHW4 92 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 GDAP1Q8TB36 358 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 ADAMTS14Q8WXS8 1223 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 PEX13Q92968 403 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 ULK4Q96C45 1275 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 DNAJC1Q96KC8 554 aaKnown RBP11.69□□□□□ -0.54
HSPG2-206ENST00000439717 ZCCHC2Q9C0B9 1178 aaKnown RBP11.69□□□□□ -0.54
HSPG2-206ENST00000439717 OR2AG1Q9H205 316 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 ASB8Q9H765 288 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 UGT1A7Q9HAW7 530 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 UGT1A10Q9HAW8 530 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 UGT1A8Q9HAW9 530 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 PIH1D1Q9NWS0 290 aaKnown RBP11.69□□□□□ -0.54
HSPG2-206ENST00000439717 ZNHIT2Q9UHR6 403 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 FKBPLQ9UIM3 349 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 GPR34Q9UPC5 381 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 SLC30A1Q9Y6M5 507 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 U3KQA8 63 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 PCNX2A6NKB5 2137 aa11.69□□□□□ -0.54
HSPG2-206ENST00000439717 TDRD6O60522 2096 aaKnown RBP11.68□□□□□ -0.54
HSPG2-206ENST00000439717 MED19A0JLT2 244 aaPredicted RBP11.68□□□□□ -0.54
HSPG2-206ENST00000439717 EME2A4GXA9 379 aaPredicted RBP11.68□□□□□ -0.54
HSPG2-206ENST00000439717 KMOO15229 486 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 CDK14O94921 469 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 GP1BAP07359 652 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 ITGALP20701 1170 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 PMLP29590 882 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 MC4RP32245 332 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 VPS41P49754 854 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 TMPRSS15P98073 1019 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 E2F1Q01094 437 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 TCEA2Q15560 299 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 GPR33Q49SQ1 333 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 PCID2Q5JVF3 399 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 ZNF648Q5T619 568 aaPredicted RBP11.68□□□□□ -0.54
HSPG2-206ENST00000439717 GPRC6AQ5T6X5 926 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 RAB44Q7Z6P3 723 aaPredicted RBP11.68□□□□□ -0.54
HSPG2-206ENST00000439717 LRRTM4Q86VH4 590 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 SLC35F3Q8IY50 421 aa11.68□□□□□ -0.54
HSPG2-206ENST00000439717 PPHLN1Q8NEY8 458 aaKnown RBP11.68□□□□□ -0.54
HSPG2-206ENST00000439717 GPR156Q8NFN8 814 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms