RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 DNAJC6O75061 913 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 ECEL1O95672 775 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 VCLP18206 1134 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 HADHAP40939 763 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 LMAN1P49257 510 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 CLDN6P56747 220 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 TMEM115Q12893 351 aaPredicted RBP10.36□□□□□ -0.75
MCF2L-216ENST00000439475 HLTFQ14527 1009 aaKnown RBP eCLIP10.36□□□□□ -0.75
MCF2L-216ENST00000439475 CCNG2Q16589 344 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 CLPPQ16740 277 aaPredicted RBP10.36□□□□□ -0.75
MCF2L-216ENST00000439475 ISXQ2M1V0 245 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 LDLRAP1Q5SW96 308 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 CERCAMQ5T4B2 595 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 LINC00523Q86TU6 105 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 LRRTM4Q86VH4 590 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 PROSER1Q86XN7 944 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 NRROSQ86YC3 692 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 MARCH9Q86YJ5 346 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 CCNJLQ8IV13 435 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 ARL14Q8N4G2 192 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 TTC30BQ8N4P2 665 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 AVL9Q8NBF6 648 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 MDM1Q8TC05 714 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 ZNF398Q8TD17 642 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 SH3KBP1Q96B97 665 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 C19orf43Q9BQ61 176 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 TMEM121Q9BTD3 319 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 STRADBQ9C0K7 418 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 OR2AG1Q9H205 316 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 LRRC40Q9H9A6 602 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 ARNT2Q9HBZ2 717 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 HOMER3Q9NSC5 361 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 ZKSCAN5Q9Y2L8 839 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 OAS3Q9Y6K5 1087 aaKnown RBP10.36□□□□□ -0.75
MCF2L-216ENST00000439475 RP1P56715 2156 aa10.36□□□□□ -0.75
MCF2L-216ENST00000439475 ERI2A8K979 691 aaKnown RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 E7EVH7 732 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 NTN3O00634 580 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 LIASO43766 372 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 USP12O75317 370 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 IFNB1P01574 187 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 RPLP0P05388 317 aaKnown RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 ACP5P13686 325 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 ZNF8P17098 575 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 RBMS1P29558 406 aaKnown RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 ADRA1AP35348 466 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 FDFT1P37268 417 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 GPR3P46089 330 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 LSSP48449 732 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 PPM1FP49593 454 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 CLCNKAP51800 687 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 CCL7P80098 99 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 EIF3IQ13347 325 aaKnown RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 LAMB3Q13751 1172 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 INSCQ1MX18 579 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 ATP13A5Q4VNC0 1218 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 C4orf22Q6V702 233 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 ADGRG6Q86SQ4 1221 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 SLC9B2Q86UD5 537 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 PIM3Q86V86 326 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 C17orf82Q86X59 251 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 NAGSQ8N159 534 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 CCDC89Q8N998 374 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 Q8N9G6 341 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 OR4K2Q8NGD2 314 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 SLC38A3Q99624 504 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 APOL2Q9BQE5 337 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 ASB8Q9H765 288 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 IL26Q9NPH9 171 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 AKAP7Q9P0M2 348 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 PAK5Q9P286 719 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 DRG1Q9Y295 367 aaKnown RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 R3HDM2Q9Y2K5 976 aaKnown RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 DNMT3AQ9Y6K1 912 aaPredicted RBP10.35□□□□□ -0.75
MCF2L-216ENST00000439475 RNF215Q9Y6U7 377 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 UNC13CQ8NB66 2214 aa10.35□□□□□ -0.75
MCF2L-216ENST00000439475 ZFC3H1O60293 1989 aaKnown RBP10.34□□□□□ -0.75
MCF2L-216ENST00000439475 CCDC187A0A096LP49 1063 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 KIR2DS5A0A0G2JLQ3 304 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 A0A0G2JNG1 304 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 TCRBV7S2A1N4TA0A589 114 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 KIR2DS3K7RE56 304 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 CHUKO15111 745 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 BUD23O43709 281 aaKnown RBP10.34□□□□□ -0.75
MCF2L-216ENST00000439475 CEP104O60308 925 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 UGT1A9O60656 530 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 SNX2O60749 519 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 METTL18O95568 372 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 AP2A1O95782 977 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 CAPNS1P04632 268 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 RALBP11234 206 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 UGT1A6P19224 532 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 MSH3P20585 1137 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 UGT1A1P22309 533 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 UGT1A4P22310 534 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 ALDH4A1P30038 563 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 UGT1A3P35503 534 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 UGT1A5P35504 534 aa10.34□□□□□ -0.75
MCF2L-216ENST00000439475 INHBCP55103 352 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms