RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 HERPUD2Q9BSE4 406 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 ZSCAN5AQ9BUG6 496 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 B3GNT4Q9C0J1 378 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 CARD9Q9H257 536 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 MAGEE1Q9HCI5 957 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 CNOT6Q9ULM6 557 aaKnown RBP18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 ZNF711Q9Y462 761 aa18.27■□□□□ 0.52
AC004540.1-201ENST00000439120 ATMQ13315 3056 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 STMND1H3BQB6 276 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 SLC25A14O95258 325 aaPredicted RBP18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 CSF2RBP32927 897 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 NFATC2Q13469 925 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 SQSTM1Q13501 440 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 SLC14A2Q15849 920 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 KAZNQ674X7 775 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 TMEM71Q6P5X7 295 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 MFSD7Q6UXD7 560 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 B4GALNT4Q76KP1 1039 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 FAM129CQ86XR2 697 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 SPATA22Q8NHS9 363 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 TFB1MQ8WVM0 346 aaKnown RBP18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 SGF29Q96ES7 293 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 TAAR9Q96RI9 348 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 TRIB3Q96RU7 358 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 SRPK1Q96SB4 655 aaKnown RBP18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 OR2AG1Q9H205 316 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 OSGEPL1Q9H4B0 414 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 GLOD4Q9HC38 313 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 ARFGAP3Q9NP61 516 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 TBC1D29Q9UFV1 150 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 KALRNO60229 2985 aa18.26■□□□□ 0.51
AC004540.1-201ENST00000439120 EFSO43281 561 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 PSTPIP1O43586 416 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 NUAK1O60285 661 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 PMPCBO75439 489 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 EML2O95834 649 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 MT-CYBP00156 380 aaPredicted RBP18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 THRAP10827 490 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 MAGEA1P43355 309 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 MAPK9P45984 424 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 ATP1A2P50993 1020 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 DCDC1P59894 354 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 TEX44Q53QW1 395 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 SNAP47Q5SQN1 464 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 FAM182AQ5T1J6 154 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 PDPK2PQ6A1A2 396 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 IYDQ6PHW0 289 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 VASH2Q86V25 355 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 TRAM1L1Q8N609 369 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 AVL9Q8NBF6 648 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 GPR26Q8NDV2 337 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 ART4Q93070 314 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 ARHGAP9Q9BRR9 750 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 TRIM39Q9HCM9 518 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 SARS2Q9NP81 518 aaKnown RBP18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 TMEM9Q9P0T7 183 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 ATXN10Q9UBB4 475 aa18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 PCYT1BQ9Y5K3 369 aaPredicted RBP18.25■□□□□ 0.51
AC004540.1-201ENST00000439120 KIR2DS5A0A0G2JLQ3 304 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 A0A0G2JNG1 304 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 OR5K4A6NMS3 321 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 GPR89AB7ZAQ6 455 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 KIR2DS3K7RE56 304 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 MTSS1O43312 755 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 CST8O60676 142 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 NDST3O95803 873 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 GPR89BP0CG08 455 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 FGF3P11487 239 aaPredicted RBP18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 F3P13726 295 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 ZNF8P17098 575 aaPredicted RBP18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 PTPN3P26045 913 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 CDKN2BP42772 138 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 SRSF6Q13247 344 aaKnown RBP18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 KIR2DS5Q14953 304 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 TCEAL1Q15170 157 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 INSCQ1MX18 579 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 TMC3Q7Z5M5 1100 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 CCDC50Q8IVM0 306 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 NCSTNQ92542 709 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 P3H4Q92791 437 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 GLYATL1Q969I3 302 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 EID2BQ96D98 161 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 MED8Q96G25 268 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 TRIM5Q9C035 493 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 LUC7LQ9NQ29 371 aaKnown RBP18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 KLC4Q9NSK0 619 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 SLC39A1Q9NY26 324 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 UBP1Q9NZI7 540 aa18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 SAE1Q9UBE0 346 aaPredicted RBP18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.24■□□□□ 0.51
AC004540.1-201ENST00000439120 EFCAB7A8K855 629 aa18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 A8MU76 341 aa18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 PRKD1Q15139 912 aaPredicted RBP18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 LLGL1Q15334 1064 aa18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 PLA2G4EQ3MJ16 856 aa18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 TFDP3Q5H9I0 405 aa18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 ZNF648Q5T619 568 aaPredicted RBP18.23■□□□□ 0.51
AC004540.1-201ENST00000439120 DCAF12Q5T6F0 453 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms