RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 FGF1P05230 155 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 HLA-DPA1P20036 260 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 CDH13P55290 713 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 SLC7A9P82251 487 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 OGFRL1Q5TC84 451 aaPredicted RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 BBS5Q8N3I7 341 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 GALNT4Q8N4A0 578 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 FEM1CQ96JP0 617 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 NSMCE3Q96MG7 304 aa13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 MTIF3Q9H2K0 278 aaKnown RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 EML4Q9HC35 981 aaKnown RBP13.82□□□□□ -0.2
PTCHD3-201ENST00000438700 UBA6A0AVT1 1052 aaPredicted RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 TYW5A2RUC4 315 aaKnown RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 GFRA2O00451 464 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 CASQ2O14958 399 aaPredicted RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 GRM6O15303 877 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 PFDN1O60925 122 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 RPL5P46777 297 aaKnown RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 CDKL1Q00532 357 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 CEACAM7Q14002 265 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 FLOT2Q14254 428 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 FAM45BPQ6NSW5 357 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 FAM156AQ8NDB6 213 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 FAM45AQ8TCE6 357 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 SERPINI1Q99574 410 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 MGME1Q9BQP7 344 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 SLC46A2Q9BY10 475 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 GSTO2Q9H4Y5 243 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 COPS7BQ9H9Q2 264 aaPredicted RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 CHCHD3Q9NX63 227 aaKnown RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 FNDC3AQ9Y2H6 1198 aaKnown RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 SH3BP1Q9Y3L3 701 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 HELZP42694 1942 aaKnown RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 H3BSA7 217 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 SNAP91O60641 907 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 RPP40O75818 363 aaKnown RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 SIX3O95343 332 aaPredicted RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 CDK4P11802 303 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 NELFEP18615 380 aaKnown RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 MZF1P28698 734 aaPredicted RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 HPCAP84074 193 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 TIAL1Q01085 375 aaKnown RBP eCLIP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 CAMK1Q14012 370 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 PIGGQ5H8A4 983 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 ALG1LQ6GMV1 187 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 MRNIPQ6NTE8 343 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 LINGO4Q6UY18 593 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 GALNT7Q86SF2 657 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 BBS7Q8IWZ6 715 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 FAM217AQ8IXS0 508 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 LILRA2Q8N149 483 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 PELI3Q8N2H9 469 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 PQLC1Q8N2U9 271 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 WFDC5Q8TCV5 224 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 BRSK1Q8TDC3 778 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 RMDN1Q96DB5 314 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 PSKH2Q96QS6 385 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 RBM38Q9H0Z9 239 aaKnown RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 LIN28AQ9H9Z2 209 aaKnown RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 EFCAB1Q9HAE3 211 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 CATSPERZQ9NTU4 200 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 CCDC167Q9P0B6 97 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 PRPF19Q9UMS4 504 aaKnown RBP13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 RWDD3Q9Y3V2 267 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 AP4B1Q9Y6B7 739 aa13.81□□□□□ -0.2
PTCHD3-201ENST00000438700 A0A0J9YVX5 310 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 LRRC14BA6NHZ5 514 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 GRXCR1A8MXD5 290 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 PPP6CO00743 305 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 SLC22A2O15244 555 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 WISP3O95389 354 aaPredicted RBP13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 FDXRP22570 491 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 GALK1P51570 392 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 ARF5P84085 180 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 CDH18Q13634 790 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 ZNF423Q2M1K9 1284 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 FBXO48Q5FWF7 155 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 B3GNT6Q6ZMB0 384 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 SLC22A9Q8IVM8 553 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 PGAM4Q8N0Y7 254 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 MARVELD2Q8N4S9 558 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 OR4L1Q8NH43 312 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 ABTB1Q969K4 478 aaPredicted RBP13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 TCEAL4Q96EI5 215 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 MEAF6Q9HAF1 191 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 POLR3BQ9NW08 1133 aaPredicted RBP13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 PTTG2Q9NZH5 202 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 FAM50BQ9Y247 325 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 SPO11Q9Y5K1 396 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 CHD9Q3L8U1 2897 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 H3BMM5 538 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 UBXN8O00124 270 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 LEFTY2O00292 366 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 UBDO15205 165 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 AP1G1O43747 822 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 TMCC1O94876 653 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 CD1DP15813 335 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 EPCAMP16422 314 aa13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 ZNF37AP17032 561 aaPredicted RBP13.8□□□□□ -0.2
PTCHD3-201ENST00000438700 ADSLP30566 484 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms