RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 VAV2P52735 878 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 ART1P52961 327 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 PMS1P54277 932 aaKnown RBP12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 KCNAB1Q14722 419 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 CNGA3Q16281 694 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 FOXD4L6Q3SYB3 417 aaPredicted RBP12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 RAET1GQ6H3X3 334 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 IGFL3Q6UXB1 125 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 FOXD4L3Q6VB84 417 aaPredicted RBP12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 MED25Q71SY5 747 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 BNIPLQ7Z465 357 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 HSD11B1LQ7Z5J1 315 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 MRGPRGQ86SM5 289 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 ENDOVQ8N8Q3 282 aaKnown RBP12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 TMEM102Q8N9M5 508 aaPredicted RBP12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 CASKIN2Q8WXE0 1202 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 MR1Q95460 341 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 RELTQ969Z4 430 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 SH3KBP1Q96B97 665 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 CHST8Q9H2A9 424 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 CNOT8Q9UFF9 292 aaKnown RBP12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 OR12D3Q9UGF7 316 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 ARMCX3Q9UH62 379 aaPredicted RBP12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 KCNK6Q9Y257 313 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 FER1L5A0AVI2 2057 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 PIKFYVEQ9Y2I7 2098 aa12.13□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 MASP2O00187 686 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 SNX2O60749 519 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 LRIG2O94898 1065 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 TNFAIP3P21580 790 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 MAPK1P28482 360 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 ME1P48163 572 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 GPS2Q13227 327 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 CUL4AQ13619 759 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 ZNF235Q14590 738 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 PTPRRQ15256 657 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 CACHD1Q5VU97 1274 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 CERS6Q6ZMG9 384 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 RFLNAQ6ZTI6 216 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 FAM92BQ6ZTR7 304 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 SLC9B2Q86UD5 537 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 SLC38A9Q8NBW4 561 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 KLHL6Q8WZ60 621 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 ECHDC3Q96DC8 303 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 CFAP57Q96MR6 1250 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 ZNF396Q96N95 335 aaPredicted RBP12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 SCAND2PQ9GZW5 306 aaPredicted RBP12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 TSPAN10Q9H1Z9 355 aaPredicted RBP12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 EPB41L1Q9H4G0 881 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 STN1Q9H668 368 aaKnown RBP12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 ZNF552Q9H707 407 aaPredicted RBP12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 UPF2Q9HAU5 1272 aaKnown RBP12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 PLCB1Q9NQ66 1216 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 CPNE7Q9UBL6 633 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 SNX7Q9UNH6 387 aa12.12□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 PRRC2AP48634 2157 aaKnown RBP12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 A0A0U1RQS6 177 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 LILRA5A6NI73 299 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 BECN2A8MW95 431 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 TOX3O15405 576 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 KCNN4O15554 427 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 SIAH2O43255 324 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 SOD1P00441 154 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 NELFEP18615 380 aaKnown RBP12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 TUBB3Q13509 450 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 GRM3Q14832 879 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 IZUMO3Q5VZ72 239 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 Q6ZVL8 140 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 CHST15Q7LFX5 561 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 SRLQ86TD4 932 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 GALNT13Q8IUC8 556 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 CCDC116Q8IYX3 515 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 ZADH2Q8N4Q0 377 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 FAR1Q8WVX9 515 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 HDAC11Q96DB2 347 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 DTD2Q96FN9 168 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 CCDC120Q96HB5 630 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 SGSM3Q96HU1 749 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 TRAPPC9Q96Q05 1148 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 TUBGCP5Q96RT8 1024 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 SYNCQ9H7C4 482 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 PDE7BQ9NP56 450 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 UBE2TQ9NPD8 197 aaPredicted RBP12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 FGF21Q9NSA1 209 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 TMEM63CQ9P1W3 806 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 DCTN4Q9UJW0 460 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 RARRES3Q9UL19 164 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 TCFL5Q9UL49 500 aa12.11□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 A0A1B0GVL5 298 aa12.1□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 J3KR12 359 aa12.1□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 TRAFD1O14545 582 aaPredicted RBP12.1□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 PMM2O15305 246 aa12.1□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 UBXN7O94888 489 aa12.1□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 MYL1P05976 194 aa12.1□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 AMD1P17707 334 aa12.1□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 SERPINA4P29622 427 aa12.1□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 KIR3DL1P43629 444 aa12.1□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 RRADP55042 308 aa12.1□□□□□ -0.47
SMAD9-IT1-201ENST00000437983 KCNK10P57789 538 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms