RNA–Protein interactions for RNA: ENST00000437929.5

TOP3B-208, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-208ENST00000437929 SRPK3Q9UPE1 567 aa6.9□□□□□ -1.3
TOP3B-208ENST00000437929 CNTN6Q9UQ52 1028 aa6.9□□□□□ -1.3
TOP3B-208ENST00000437929 TP53TG5Q9Y2B4 290 aa6.9□□□□□ -1.3
TOP3B-208ENST00000437929 MYO9AB2RTY4 2548 aa6.9□□□□□ -1.31
TOP3B-208ENST00000437929 USP9YO00507 2555 aaPredicted RBP6.9□□□□□ -1.31
TOP3B-208ENST00000437929 UNC13CQ8NB66 2214 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 USP9XQ93008 2570 aaPredicted RBP6.89□□□□□ -1.31
TOP3B-208ENST00000437929 UNC79Q9P2D8 2635 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 TRBV23-1A0A0A0MS06 115 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 IGHV5-10-1A0A0J9YXX1 117 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 LOC101059948A0A1B0GTJ6 334 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 FAM237AA0A1B0GTK4 181 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 TMEM110-MUSTN1A8MSY1 372 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 BECN2A8MW95 431 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 TOR1BO14657 336 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 PMM2O15305 246 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 INSIG1O15503 277 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 PIGNO95427 931 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 POP4O95707 220 aaKnown RBP6.89□□□□□ -1.31
TOP3B-208ENST00000437929 GSRP00390 522 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 PRKCGP05129 697 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 IFNGR1P15260 489 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 PNLIPP16233 465 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 GNLYP22749 145 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 OAS2P29728 719 aaKnown RBP6.89□□□□□ -1.31
TOP3B-208ENST00000437929 NOP2P46087 812 aaKnown RBP6.89□□□□□ -1.31
TOP3B-208ENST00000437929 CD97P48960 835 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 PEX5P50542 639 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 SNRPD1P62314 119 aaKnown RBP6.89□□□□□ -1.31
TOP3B-208ENST00000437929 APBA1Q02410 837 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 LRRC63Q05C16 580 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 CDC20Q12834 499 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 KLRB1Q12918 225 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 POLD3Q15054 466 aaPredicted RBP6.89□□□□□ -1.31
TOP3B-208ENST00000437929 SF1Q15637 639 aaKnown RBP6.89□□□□□ -1.31
TOP3B-208ENST00000437929 MEA1Q16626 185 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 MSMPQ1L6U9 139 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 FAM209AQ5JX71 171 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 FOXB2Q5VYV0 432 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 ANKS6Q68DC2 871 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 ISM2Q6H9L7 571 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 ZNF783Q6ZMS7 281 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 SLC26A9Q7LBE3 791 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 FAM131BQ86XD5 332 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 FAM129CQ86XR2 697 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 ZNF354CQ86Y25 554 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 NRSN1Q8IZ57 195 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 FUBP1Q96AE4 644 aaKnown RBP6.89□□□□□ -1.31
TOP3B-208ENST00000437929 EXOC2Q96KP1 924 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 C1orf74Q96LT6 269 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 CATSPER2Q96P56 530 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 CTRCQ99895 268 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 MCMBPQ9BTE3 642 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 CDADC1Q9BWV3 514 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 SCAND2PQ9GZW5 306 aaPredicted RBP6.89□□□□□ -1.31
TOP3B-208ENST00000437929 CDH19Q9H159 772 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 GPN2Q9H9Y4 310 aaPredicted RBP6.89□□□□□ -1.31
TOP3B-208ENST00000437929 RMND1Q9NWS8 449 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 OCIAD1Q9NX40 245 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 SLC39A1Q9NY26 324 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.89□□□□□ -1.311e-6■□□□□ 10.4
TOP3B-208ENST00000437929 TMEM9Q9P0T7 183 aa6.89□□□□□ -1.31
TOP3B-208ENST00000437929 MRPS18BQ9Y676 258 aaKnown RBP6.89□□□□□ -1.31
TOP3B-208ENST00000437929 DOCK4Q8N1I0 1966 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 EFCAB7A8K855 629 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 RHPN2P1A8MT19 583 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 HGSO14964 777 aaPredicted RBP6.88□□□□□ -1.31
TOP3B-208ENST00000437929 P4HA2O15460 535 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 NUDT21O43809 227 aaKnown RBP6.88□□□□□ -1.31
TOP3B-208ENST00000437929 TMCC1O94876 653 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 ASMTLO95671 621 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 HSP90AA1P07900 732 aaKnown RBP6.88□□□□□ -1.31
TOP3B-208ENST00000437929 XPAP23025 273 aaPredicted RBP6.88□□□□□ -1.31
TOP3B-208ENST00000437929 RPL10P27635 214 aaKnown RBP6.88□□□□□ -1.31
TOP3B-208ENST00000437929 CD1CP29017 333 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 CSF2RBP32927 897 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 CSTF2P33240 577 aaKnown RBP eCLIP6.88□□□□□ -1.31
TOP3B-208ENST00000437929 PPM1FP49593 454 aaPredicted RBP6.88□□□□□ -1.31
TOP3B-208ENST00000437929 TMEM52BQ4KMG9 183 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 RAB6CQ53S08 254 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 C2CD6Q53TS8 623 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 FHL5Q5TD97 284 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 KLHL10Q6JEL2 608 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 TRNP1Q6NT89 227 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 RWDD4Q6NW29 188 aaKnown RBP6.88□□□□□ -1.31
TOP3B-208ENST00000437929 PHLDB2Q86SQ0 1253 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 TEX19Q8NA77 164 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 ZNF397Q8NF99 534 aaPredicted RBP6.88□□□□□ -1.31
TOP3B-208ENST00000437929 OR56A4Q8NGH8 313 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 ATL2Q8NHH9 583 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 PATE1Q8WXA2 126 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 ISG20Q96AZ6 181 aaKnown RBP6.88□□□□□ -1.31
TOP3B-208ENST00000437929 MISP3Q96FF7 219 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 HMCESQ96FZ2 354 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 SLC45A3Q96JT2 553 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 CFAP57Q96MR6 1250 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 GDAP1L1Q96MZ0 367 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 CRACR2AQ9BSW2 395 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 MAGEB5Q9BZ81 275 aa6.88□□□□□ -1.31
TOP3B-208ENST00000437929 B3GNT4Q9C0J1 378 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms