RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 VILLO15195 856 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 CD3EAPO15446 510 aaKnown RBP15.21■□□□□ 0.03
CNOT9-205ENST00000433439 MAGEC1O60732 1142 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 F7P08709 466 aaPredicted RBP15.21■□□□□ 0.03
CNOT9-205ENST00000433439 MYCLP1P12525 358 aaPredicted RBP15.21■□□□□ 0.03
CNOT9-205ENST00000433439 PSMA3P25788 255 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 ARNTP27540 789 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 TRIM23P36406 574 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 NBL1P41271 181 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 POLD2P49005 469 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 YPEL5P62699 121 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 NFATC4Q14934 902 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 KYNUQ16719 465 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 GPR33Q49SQ1 333 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 HSP90AA5PQ58FG0 334 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 ZNF542PQ5EBM4 170 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 TRIM61Q5EBN2 209 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 PRAMEF14Q5SWL7 426 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 GPRC6AQ5T6X5 926 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 ARMC3Q5W041 872 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 PDPK2PQ6A1A2 396 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 TRMT10BQ6PF06 316 aaKnown RBP15.21■□□□□ 0.03
CNOT9-205ENST00000433439 C3orf62Q6ZUJ4 267 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 KCNMB4Q86W47 210 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 PIANPQ8IYJ0 282 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 GSDMBQ8TAX9 411 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 FAM174AQ8TBP5 190 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 NAT14Q8WUY8 206 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 RUBCNQ92622 972 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 ULK4Q96C45 1275 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 WDR92Q96MX6 357 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 TTC25Q96NG3 672 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 C19orf43Q9BQ61 176 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 PHACTR1Q9C0D0 580 aa15.21■□□□□ 0.03
CNOT9-205ENST00000433439 CDC42EP4Q9H3Q1 356 aaKnown RBP15.21■□□□□ 0.03
CNOT9-205ENST00000433439 IARS2Q9NSE4 1012 aaKnown RBP15.21■□□□□ 0.03
CNOT9-205ENST00000433439 MARCH4Q9P2E8 410 aaPredicted RBP15.21■□□□□ 0.03
CNOT9-205ENST00000433439 OAS3Q9Y6K5 1087 aaKnown RBP15.21■□□□□ 0.03
CNOT9-205ENST00000433439 TMEM202A6NGA9 273 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 GFRA3O60609 400 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 LMNAP02545 664 aaKnown RBP15.2■□□□□ 0.02
CNOT9-205ENST00000433439 RETP07949 1114 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 MSH3P20585 1137 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 KELP23276 732 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 TEAD1P28347 426 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 TNFRSF8P28908 595 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 PMLP29590 882 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 ARCN1P48444 511 aaKnown RBP15.2■□□□□ 0.02
CNOT9-205ENST00000433439 KIAA1024LP59773 190 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 OVGP1Q12889 678 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 PTK2BQ14289 1009 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 SEMA3AQ14563 771 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 SLMAPQ14BN4 828 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 TCEA2Q15560 299 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 KHDC1Q4VXA5 237 aaKnown RBP15.2■□□□□ 0.02
CNOT9-205ENST00000433439 STEAP4Q687X5 459 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 ZNF470Q6ECI4 717 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 TCEAL6Q6IPX3 200 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 NEPROQ6NW34 567 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 DET1Q7L5Y6 550 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 RABEPKQ7Z6M1 372 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 SDCCAG8Q86SQ7 713 aaPredicted RBP15.2■□□□□ 0.02
CNOT9-205ENST00000433439 IQCHQ86VS3 1027 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 SPATS2Q86XZ4 545 aaKnown RBP15.2■□□□□ 0.02
CNOT9-205ENST00000433439 SLC22A18ASQ8N1D0 253 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 NXPE1Q8N323 547 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 CEP76Q8TAP6 659 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 TCEAL3Q969E4 200 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 TSACCQ96A04 125 aaPredicted RBP15.2■□□□□ 0.02
CNOT9-205ENST00000433439 CERS2Q96G23 380 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 DCUN1D1Q96GG9 259 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 VPS35Q96QK1 796 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 OR2AG1Q9H205 316 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 PLAC1Q9HBJ0 212 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 MRPL40Q9NQ50 206 aaKnown RBP15.2■□□□□ 0.02
CNOT9-205ENST00000433439 NINJ2Q9NZG7 142 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 SLC17A6Q9P2U8 582 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 KLQ9UEF7 1012 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 SLC6A14Q9UN76 642 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 ANKRD6Q9Y2G4 727 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 PCDHGA5Q9Y5G8 931 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 SNX11Q9Y5W9 270 aa15.2■□□□□ 0.02
CNOT9-205ENST00000433439 KHNYNO15037 678 aaKnown RBP15.19■□□□□ 0.02
CNOT9-205ENST00000433439 NDUFS3O75489 264 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 PIAS1O75925 651 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 ACSL3O95573 720 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 MCM3P25205 808 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 ACRV1P26436 265 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 HOXD12P35452 270 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 NXPH1P58417 271 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 GPX6P59796 221 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 IRX4P78413 519 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 SPEM2Q0P670 501 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 CTBP1Q13363 440 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 GTF2H3Q13889 308 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 FZD2Q14332 565 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 DBN1Q16643 649 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 KIF19Q2TAC6 998 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 LDLRAP1Q5SW96 308 aa15.19■□□□□ 0.02
CNOT9-205ENST00000433439 UBAP2Q5T6F2 1119 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms