RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 ZNF487B1APH4 448 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 DNAJC6O75061 913 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ITGB2P05107 769 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 MMP2P08253 660 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 KRT7P08729 469 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 H2AFZP0C0S5 128 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 THRAP10827 490 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CCL4P13236 92 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 MX2P20592 715 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CA4P22748 312 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CASP14P31944 242 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 GJC1P36383 396 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 GMPRP36959 345 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 PTGIRP43119 386 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ARSDP51689 593 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 LIMK2P53671 638 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 MAPK10P53779 464 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 EPHB1P54762 984 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SLC10A2Q12908 348 aaPredicted RBP9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 TRA2AQ13595 282 aaKnown RBP eCLIP9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SLC18A3Q16572 532 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ASTE1Q2TB18 679 aaPredicted RBP9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 HENMT1Q5T8I9 393 aaKnown RBP9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 USP53Q70EK8 1073 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 H2AFVQ71UI9 128 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ZFAND4Q86XD8 727 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 GALNT13Q8IUC8 556 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 MAP7D3Q8IWC1 876 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SFRP1Q8N474 314 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 RCBTB1Q8NDN9 531 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SLC37A2Q8TED4 501 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CTNNBL1Q8WYA6 563 aaPredicted RBP9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SGF29Q96ES7 293 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CCDC74BQ96LY2 380 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 DNAJC7Q99615 494 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 RIOK2Q9BVS4 552 aaKnown RBP9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 PCDH9Q9HC56 1237 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 AKAP7Q9P0M2 348 aaPredicted RBP9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 SEPT10Q9P0V9 454 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 IFNKQ9P0W0 207 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 VPS18Q9P253 973 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CTTNBP2NLQ9P2B4 639 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 PDP2Q9P2J9 529 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 CNOT6Q9ULM6 557 aaKnown RBP9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 TTLL3Q9Y4R7 772 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 PCDHGA3Q9Y5H0 932 aa9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 PCYT1BQ9Y5K3 369 aaPredicted RBP9.34□□□□□ -0.91
CDC42-IT1-201ENST00000431803 ZFC3H1O60293 1989 aaKnown RBP9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 SDK2Q58EX2 2172 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 C1orf232A0A0U1RR37 186 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 RGSL1A5PLK6 1076 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 A6NCN8 305 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 FADS2P1A8MWK0 482 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 B8ZZF3 427 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 GOLGA6L19H0YKK7 550 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 AGRPO00253 132 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 INPP4BO15327 924 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 CLDN7O95471 211 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 EML2O95834 649 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 FGF3P11487 239 aaPredicted RBP9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 WT1P19544 449 aaPredicted RBP9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 SPINT3P49223 89 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 GPLD1P80108 840 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 IFI35P80217 286 aaPredicted RBP9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 PPIDQ08752 370 aaKnown RBP9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 ZBTB17Q13105 803 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 LINC00303Q3SY05 128 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 TMEM164Q5U3C3 297 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 NKAIN2Q5VXU1 208 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 MARK2Q7KZI7 788 aaKnown RBP9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 VASH2Q86V25 355 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 VSIG1Q86XK7 387 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 CCDC13Q8IYE1 715 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 PLD5Q8N7P1 536 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 CNTD1Q8N815 330 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 EXD3Q8N9H8 876 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 LPCAT1Q8NF37 534 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 RAPGEF5Q92565 580 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 PMEPA1Q969W9 287 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 RNF157Q96PX1 679 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 DPYSL5Q9BPU6 564 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 XPO4Q9C0E2 1151 aaKnown RBP9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 KCNK4Q9NYG8 393 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 TMEM9Q9P0T7 183 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 OAS3Q9Y6K5 1087 aaKnown RBP9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 COL12A1Q99715 3063 aa9.33□□□□□ -0.92
CDC42-IT1-201ENST00000431803 SSU72P8A0A1W2PR75 194 aa9.32□□□□□ -0.92
CDC42-IT1-201ENST00000431803 C3orf70A6NLC5 250 aaPredicted RBP9.32□□□□□ -0.92
CDC42-IT1-201ENST00000431803 ANKRD66B4E2M5 251 aa9.32□□□□□ -0.92
CDC42-IT1-201ENST00000431803 STMND1H3BQB6 276 aa9.32□□□□□ -0.92
CDC42-IT1-201ENST00000431803 J3QKU1 62 aa9.32□□□□□ -0.92
CDC42-IT1-201ENST00000431803 KCNK1O00180 336 aa9.32□□□□□ -0.92
CDC42-IT1-201ENST00000431803 JCHAINP01591 159 aa9.32□□□□□ -0.92
CDC42-IT1-201ENST00000431803 ATP1A1P05023 1023 aaKnown RBP9.32□□□□□ -0.92
CDC42-IT1-201ENST00000431803 TMEM253P0C7T8 217 aa9.32□□□□□ -0.92
CDC42-IT1-201ENST00000431803 KDELR1P24390 212 aa9.32□□□□□ -0.92
CDC42-IT1-201ENST00000431803 CD86P42081 329 aa9.32□□□□□ -0.92
CDC42-IT1-201ENST00000431803 BIRC2Q13490 618 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms