RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 HNF4GQ14541 408 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 MEA1Q16626 185 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 DECR1Q16698 335 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 MRGPRG-AS1Q2M3A8 158 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 DUSP28Q4G0W2 176 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 ASPRV1Q53RT3 343 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 RAB41Q5JT25 222 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 FAM69BQ5VUD6 431 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 ZDHHC20Q5W0Z9 365 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 KRT79Q5XKE5 535 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 LRRC8EQ6NSJ5 796 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 PAPD4Q6PIY7 484 aaKnown RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 SPSB3Q6PJ21 355 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 BRAT1Q6PJG6 821 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 SLC36A4Q6YBV0 504 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 QSOX2Q6ZRP7 698 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 TPRG1Q6ZUI0 275 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 CHST9Q7L1S5 443 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 SFR1Q86XK3 245 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 RNF113BQ8IZP6 322 aaKnown RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 CNTROBQ8N137 903 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 METTL27Q8N6F8 245 aaPredicted RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 OR1J2Q8NGS2 313 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 ERGIC1Q969X5 290 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 SAT2Q96F10 170 aaPredicted RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 CDCA5Q96FF9 252 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 CALML4Q96GE6 196 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 HES6Q96HZ4 224 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 SMC6Q96SB8 1091 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 NEURL2Q9BR09 285 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 ITPAQ9BY32 194 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 ESRP2Q9H6T0 727 aaKnown RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 UBTD1Q9HAC8 227 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 EPB41L5Q9HCM4 733 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 SLC35C2Q9NQQ7 365 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 PCDHB16Q9NRJ7 776 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 ACSS1Q9NUB1 689 aaPredicted RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 SEPT11Q9NVA2 429 aaKnown RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 TRMT1Q9NXH9 659 aaKnown RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 MARCH4Q9P2E8 410 aaPredicted RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 IL17BQ9UHF5 180 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 AMACRQ9UHK6 382 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 DBNLQ9UJU6 430 aaKnown RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 POU2F3Q9UKI9 436 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 MKLN1Q9UL63 735 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 CORO1CQ9ULV4 474 aaPredicted RBP2.13□□□□□ -2.07
CDC40-204ENST00000431461 RABGAP1Q9Y3P9 1069 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 ADAM18Q9Y3Q7 739 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 CMAHPQ9Y471 501 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 NME7Q9Y5B8 376 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 SNX8Q9Y5X2 465 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 PIAS3Q9Y6X2 628 aa2.13□□□□□ -2.07
CDC40-204ENST00000431461 A0A1W2PS18 150 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 hDV102S1A0JD36 115 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 LINC01553A4QN01 128 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 M0QZ24 198 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 TGFB1I1O43294 461 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 MITFO75030 526 aaPredicted RBP2.12□□□□□ -2.07
CDC40-204ENST00000431461 NDUFS7O75251 213 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 PPP1R3DO95685 299 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 MLYCDO95822 493 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 FTCDO95954 541 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 EGFP01133 1207 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 TPOP07202 933 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 UGT1A1P22309 533 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 ICAM3P32942 547 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 HOXD13P35453 343 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 GNL1P36915 607 aaPredicted RBP2.12□□□□□ -2.07
CDC40-204ENST00000431461 SLC15A1P46059 708 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 MMP14P50281 582 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 GPR143P51810 404 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 PNLIPRP2P54317 469 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 GALCP54803 685 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 PITX1P78337 314 aaPredicted RBP2.12□□□□□ -2.07
CDC40-204ENST00000431461 MRPS5P82675 430 aaKnown RBP2.12□□□□□ -2.07
CDC40-204ENST00000431461 PDE1BQ01064 536 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 IKQ13123 557 aaPredicted RBP2.12□□□□□ -2.07
CDC40-204ENST00000431461 SNTA1Q13424 505 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 KCNC3Q14003 757 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 MVPQ14764 893 aaKnown RBP2.12□□□□□ -2.07
CDC40-204ENST00000431461 NR1D2Q14995 579 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 SLC39A14Q15043 492 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 MED22Q15528 200 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 SYT16Q17RD7 645 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 ALG11Q2TAA5 492 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 COL28A1Q2UY09 1125 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 MMEL1Q495T6 779 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 TMEM35AQ53FP2 167 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 ZNF805Q5CZA5 627 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 KCNT1Q5JUK3 1230 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 CCNYL2Q5T2Q4 361 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 GKAP1Q5VSY0 366 aaPredicted RBP2.12□□□□□ -2.07
CDC40-204ENST00000431461 DHRS7BQ6IAN0 325 aaPredicted RBP2.12□□□□□ -2.07
CDC40-204ENST00000431461 CFAP161Q6P656 301 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 CLEC4GQ6UXB4 293 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 UNQ6126/PRO20091Q6UXV3 157 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 PRPF39Q86UA1 669 aaKnown RBP2.12□□□□□ -2.07
CDC40-204ENST00000431461 NOXA1Q86UR1 476 aa2.12□□□□□ -2.07
CDC40-204ENST00000431461 MUC20Q8N307 709 aaPredicted RBP2.12□□□□□ -2.07
CDC40-204ENST00000431461 SRBD1Q8N5C6 995 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms