RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 ACTL9Q8TC94 416 aa17.42■□□□□ 0.38
NUP50-208ENST00000430547 KCNE4Q8WWG9 221 aa17.42■□□□□ 0.38
NUP50-208ENST00000430547 PATE1Q8WXA2 126 aa17.42■□□□□ 0.38
NUP50-208ENST00000430547 EID2BQ96D98 161 aa17.42■□□□□ 0.38
NUP50-208ENST00000430547 CARD9Q9H257 536 aa17.42■□□□□ 0.38
NUP50-208ENST00000430547 TRABDQ9H4I3 376 aa17.42■□□□□ 0.38
NUP50-208ENST00000430547 STN1Q9H668 368 aaKnown RBP17.42■□□□□ 0.38
NUP50-208ENST00000430547 HACD3Q9P035 362 aa17.42■□□□□ 0.38
NUP50-208ENST00000430547 AMFRQ9UKV5 643 aa17.42■□□□□ 0.38
NUP50-208ENST00000430547 CNOT6Q9ULM6 557 aaKnown RBP17.42■□□□□ 0.38
NUP50-208ENST00000430547 LOC285095A0A1B0GVY8 99 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 A0A1W2PNU3 283 aaPredicted RBP17.41■□□□□ 0.38
NUP50-208ENST00000430547 GRID2IPA4D2P6 1211 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 GRID2O43424 1007 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 TJP3O95049 919 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 CPNE6O95741 557 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 EPOP01588 193 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 ITGA2BP08514 1039 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 ACP5P13686 325 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 SLC2A4P14672 509 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 BPIP17213 487 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 HLA-DPA1P20036 260 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 PTPN7P35236 360 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 GPR3P46089 330 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 OR1D5P58170 312 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 EIF3EP60228 445 aaKnown RBP17.41■□□□□ 0.38
NUP50-208ENST00000430547 B4GALNT1Q00973 533 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 SIRPB2Q5JXA9 342 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 PHF19Q5T6S3 580 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 KDELC1Q6UW63 502 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 ZNF438Q7Z4V0 828 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 SPACA3Q8IXA5 215 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 GLYATL1Q969I3 302 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 CCDC97Q96F63 343 aaPredicted RBP17.41■□□□□ 0.38
NUP50-208ENST00000430547 PLEKHG4BQ96PX9 1271 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 OR2AG1Q9H205 316 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 GBA3Q9H227 469 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 RDH14Q9HBH5 336 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 ARFGAP3Q9NP61 516 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 AKAP7Q9P0M2 348 aaPredicted RBP17.41■□□□□ 0.38
NUP50-208ENST00000430547 KCNK6Q9Y257 313 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 SPO11Q9Y5K1 396 aa17.41■□□□□ 0.38
NUP50-208ENST00000430547 GOLGA6L9A6NEM1 432 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 GPR89AB7ZAQ6 455 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 NUAK1O60285 661 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 ANXA9O76027 345 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 GPR89BP0CG08 455 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 RBP3P10745 1247 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 HMGCLP35914 325 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 GEMP55040 296 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 NR1D2Q14995 579 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 SLC1A5Q15758 541 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 CLPPQ16740 277 aaPredicted RBP17.4■□□□□ 0.38
NUP50-208ENST00000430547 DARS2Q6PI48 645 aaKnown RBP17.4■□□□□ 0.38
NUP50-208ENST00000430547 GLT6D1Q7Z4J2 308 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 JAMLQ86YT9 394 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 LRRC57Q8N9N7 239 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 GDAP1Q8TB36 358 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 BLOC1S5Q8TDH9 187 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 TMEM159Q96B96 161 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 CRELD1Q96HD1 420 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 OXNAD1Q96HP4 312 aaPredicted RBP17.4■□□□□ 0.38
NUP50-208ENST00000430547 MRGPRX2Q96LB1 330 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 CMKLR1Q99788 373 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 DESI2Q9BSY9 194 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 TRIM39Q9HCM9 518 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 BPIFA1Q9NP55 256 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 KCNK4Q9NYG8 393 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 ATXN10Q9UBB4 475 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 LOXL2Q9Y4K0 774 aa17.4■□□□□ 0.38
NUP50-208ENST00000430547 TRBV23OR9-2A0A075B6M9 112 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 PMS2P1A4D2B8 440 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 MIF4GDA9UHW6 222 aaKnown RBP17.39■□□□□ 0.37
NUP50-208ENST00000430547 AURKAO14965 403 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 KCNN4O15554 427 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 KLK10O43240 276 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 SNX2O60749 519 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 ZNF189O75820 626 aaPredicted RBP17.39■□□□□ 0.37
NUP50-208ENST00000430547 ZNF8P17098 575 aaPredicted RBP17.39■□□□□ 0.37
NUP50-208ENST00000430547 UGT1A5P35504 534 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 CHRNA4P43681 627 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 UCNP55089 124 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 TLE3Q04726 772 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 PRPSAP1Q14558 356 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 INSCQ1MX18 579 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 ZDHHC20Q5W0Z9 365 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 TMEM139Q8IV31 216 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 SLC37A2Q8TED4 501 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 ALG3Q92685 438 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 LRRC45Q96CN5 670 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 PRR11Q96HE9 360 aaPredicted RBP17.39■□□□□ 0.37
NUP50-208ENST00000430547 AHCYL2Q96HN2 611 aaKnown RBP17.39■□□□□ 0.37
NUP50-208ENST00000430547 FCRL3Q96P31 734 aaPredicted RBP17.39■□□□□ 0.37
NUP50-208ENST00000430547 SLC38A3Q99624 504 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 HERPUD2Q9BSE4 406 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 DPH1Q9BZG8 443 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 OSGEPL1Q9H4B0 414 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 C10orf88Q9H8K7 445 aa17.39■□□□□ 0.37
NUP50-208ENST00000430547 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.39■□□□□ 0.37
NUP50-208ENST00000430547 PISDQ9UG56 409 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms