RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 SLIRPQ9GZT3 109 aaKnown RBP11.02□□□□□ -0.64
SEMA4D-209ENST00000429836 CARS2Q9HA77 564 aaKnown RBP11.02□□□□□ -0.64
SEMA4D-209ENST00000429836 NRBP2Q9NSY0 501 aa11.02□□□□□ -0.64
SEMA4D-209ENST00000429836 ADPRHL2Q9NX46 363 aa11.02□□□□□ -0.64
SEMA4D-209ENST00000429836 NSMCE4AQ9NXX6 385 aa11.02□□□□□ -0.64
SEMA4D-209ENST00000429836 UTS2RQ9UKP6 389 aa11.02□□□□□ -0.64
SEMA4D-209ENST00000429836 A0A087X1B8 175 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 ACKR2O00590 384 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 SSX4O60224 188 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 MT-CYBP00156 380 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 FMO3P31513 532 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 PLIN5Q00G26 463 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 UGP2Q16851 508 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 UNC50Q53HI1 259 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 FBXO48Q5FWF7 155 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 SNAP47Q5SQN1 464 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 TTC23Q5W5X9 447 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 BLOC1S3Q6QNY0 202 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 PTRH1Q86Y79 214 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 MCFD2Q8NI22 146 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 MCOLN3Q8TDD5 553 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 SH3RF2Q8TEC5 729 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 FRS2Q8WU20 508 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 PHF10Q8WUB8 498 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 TWIST2Q8WVJ9 160 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 CDHR1Q96JP9 859 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 UBXN10Q96LJ8 280 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 DMRTB1Q96MA1 342 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 NSMCE2Q96MF7 247 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 GAD1Q99259 594 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 CXCL16Q9H2A7 254 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 MRPL42Q9Y6G3 142 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 NRCAMQ92823 1304 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 G3V2T6 193 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 DCLK1O15075 740 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 USP2O75604 605 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 CNTN5O94779 1100 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 UMPSP11172 480 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 POLD2P49005 469 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 TUFMP49411 452 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 GABARAPL2P60520 117 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 FKBP1AP62942 108 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 BST2Q10589 180 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 PAFAH1B3Q15102 231 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 PLA2G4EQ3MJ16 856 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 OTUD1Q5VV17 481 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 PKN3Q6P5Z2 889 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 TTC23LQ6PF05 361 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 ZDHHC13Q8IUH4 622 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 SYTL1Q8IYJ3 562 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 NSUN5Q96P11 429 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 ZNF300Q96RE9 604 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 YME1L1Q96TA2 773 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 ASPSCR1Q9BZE9 553 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 ATXN3LQ9H3M9 355 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 TUBB1Q9H4B7 451 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 MID1IP1Q9NPA3 183 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 SLC52A3Q9NQ40 469 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 CNGB3Q9NQW8 809 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 FBXO10Q9UK96 956 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 SNX10Q9Y5X0 201 aa11.02□□□□□ -0.65
SEMA4D-209ENST00000429836 A0A1B0GTL3 188 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 C1RP00736 705 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 ATICP31939 592 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 BAG6P46379 1132 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 TMEM132DQ14C87 1099 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 SLC10A6Q3KNW5 377 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 HABP4Q5JVS0 413 aaKnown RBP11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 ZNF678Q5SXM1 525 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 CCBE1Q6UXH8 406 aaPredicted RBP11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 PHYKPLQ8IUZ5 450 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 PLD3Q8IV08 490 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 RYBPQ8N488 228 aaPredicted RBP11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 BEND7Q8N7W2 519 aaPredicted RBP11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 ASCC1Q8N9N2 400 aaKnown RBP11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 IPMKQ8NFU5 416 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 NUDT8Q8WV74 236 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 LPAR1Q92633 364 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 CELF6Q96J87 481 aaKnown RBP11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 SPATA17Q96L03 361 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 FEM1AQ9BSK4 669 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 ZBED2Q9BTP6 218 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 TRIM54Q9BYV2 358 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 NECTIN3Q9NQS3 549 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 DPP3Q9NY33 737 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 MOSPD1Q9UJG1 213 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 FBXO5Q9UKT4 447 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 INTS6Q9UL03 887 aaKnown RBP11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 KIAA1257Q9ULG3 409 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 FAM172BPA6NC97 362 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 UBXN8O00124 270 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 SCO2O43819 266 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 HS6ST1O60243 411 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 DAB1O75553 588 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 PARNO95453 639 aaKnown RBP11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 MYL3P08590 195 aa11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 LTA4HP09960 611 aaKnown RBP11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 COL11A2P13942 1736 aaPredicted RBP11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 POLR2EP19388 210 aaKnown RBP11.01□□□□□ -0.65
SEMA4D-209ENST00000429836 IMPDH1P20839 514 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms