RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 MAB21L3Q8N8X9 362 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 UPF1Q92900 1129 aaKnown RBP eCLIP12.72□□□□□ -0.37
LDB3-205ENST00000429277 DNAJC5Q9H3Z4 198 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 GPN1Q9HCN4 374 aaPredicted RBP12.72□□□□□ -0.37
LDB3-205ENST00000429277 IL1RAPQ9NPH3 570 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 GMIPQ9P107 970 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 ZBTB22O15209 634 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 SCELO95171 688 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 OR5F1O95221 314 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 ZNF132P52740 706 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 KLF10Q13118 480 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 MYBPC3Q14896 1274 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 SF1Q15637 639 aaKnown RBP12.72□□□□□ -0.37
LDB3-205ENST00000429277 UGCGQ16739 394 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 ATAT1Q5SQI0 421 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 PIK3R6Q5UE93 754 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 ZYG11AQ6WRX3 759 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 DNAJB7Q7Z6W7 309 aaPredicted RBP12.72□□□□□ -0.37
LDB3-205ENST00000429277 GALNT13Q8IUC8 556 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 HNRNPABQ99729 332 aaKnown RBP12.72□□□□□ -0.37
LDB3-205ENST00000429277 MCMBPQ9BTE3 642 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 CDADC1Q9BWV3 514 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 PRRG4Q9BZD6 226 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 FAM83DQ9H4H8 585 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 GPC6Q9Y625 555 aaPredicted RBP12.72□□□□□ -0.37
LDB3-205ENST00000429277 NPEPPSL1A6NEC2 478 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 LRRC72A6NJI9 287 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 CTSKP43235 329 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 PPIGQ13427 754 aaKnown RBP eCLIP12.72□□□□□ -0.37
LDB3-205ENST00000429277 TMEM44Q2T9K0 475 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 MED27Q6P2C8 311 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 MPP5Q8N3R9 675 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 OR2T34Q8NGX1 318 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 OR2T3Q8NH03 318 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 PRICKLE1Q96MT3 831 aaPredicted RBP12.72□□□□□ -0.37
LDB3-205ENST00000429277 NUSAP1Q9BXS6 441 aaKnown RBP12.72□□□□□ -0.37
LDB3-205ENST00000429277 CAB39LQ9H9S4 337 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 OGDHLQ9ULD0 1010 aa12.72□□□□□ -0.37
LDB3-205ENST00000429277 UROSP10746 265 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 VARSP26640 1264 aaKnown RBP12.71□□□□□ -0.37
LDB3-205ENST00000429277 LIMK2P53671 638 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 LCP2Q13094 533 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 MED22Q15528 200 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 POM121L1PQ3SYA9 428 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 SULT1C3Q6IMI6 304 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 SCIMPQ6UWF3 145 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 TMPRSS11BQ86T26 416 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 CCDC36Q8IYA8 594 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 UNC5BQ8IZJ1 945 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 TTC29Q8NA56 475 aaPredicted RBP12.71□□□□□ -0.37
LDB3-205ENST00000429277 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 KLHL5Q96PQ7 755 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 TMEM109Q9BVC6 243 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 RAB11FIP5Q9BXF6 653 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 BCL9LQ86UU0 1499 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 H3BNX3 289 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 ADAMDEC1O15204 470 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 MATN3O15232 486 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 AHCYL1O43865 530 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 C4BPAP04003 597 aaKnown RBP12.71□□□□□ -0.37
LDB3-205ENST00000429277 GPIP06744 558 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 C8GP07360 202 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 RPS6KA3P51812 740 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 ILF3Q12906 894 aaKnown RBP eCLIP12.71□□□□□ -0.37
LDB3-205ENST00000429277 CAMK1Q14012 370 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 PRKD1Q15139 912 aaPredicted RBP12.71□□□□□ -0.37
LDB3-205ENST00000429277 TMEM63BQ5T3F8 832 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 CERCAMQ5T4B2 595 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 PARGQ86W56 976 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 MCEMP1Q8IX19 187 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 C11orf65Q8NCR3 313 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 SMG7Q92540 1137 aaKnown RBP12.71□□□□□ -0.37
LDB3-205ENST00000429277 SLC38A4Q969I6 547 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 C5orf34Q96MH7 638 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 LRRC4CQ9HCJ2 640 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 CCDC177Q9NQR7 707 aaPredicted RBP12.71□□□□□ -0.37
LDB3-205ENST00000429277 EIF2B3Q9NR50 452 aaKnown RBP12.71□□□□□ -0.37
LDB3-205ENST00000429277 TCAF1Q9Y4C2 921 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 HEBP2Q9Y5Z4 205 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 SQORQ9Y6N5 450 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 FADS2P1A8MWK0 482 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 ZMPSTE24O75844 475 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 TM4SF1P30408 202 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 MAPK10P53779 464 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 SLC5A3P53794 718 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 LLGL2Q6P1M3 1020 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 LBX2Q6XYB7 198 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 ZNF730Q6ZMV8 503 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 CHST9Q7L1S5 443 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 SLC30A8Q8IWU4 369 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 PGAM4Q8N0Y7 254 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 LRRN4CLQ8ND94 238 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 APOLD1Q96LR9 279 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 SNX7Q9UNH6 387 aa12.71□□□□□ -0.37
LDB3-205ENST00000429277 ATP6AP2A0A1C7CYW4 349 aa12.71□□□□□ -0.38
LDB3-205ENST00000429277 ELOVL7A1L3X0 281 aa12.71□□□□□ -0.38
LDB3-205ENST00000429277 ATP6AP2O75787 350 aa12.71□□□□□ -0.38
LDB3-205ENST00000429277 LRATO95237 230 aa12.71□□□□□ -0.38
LDB3-205ENST00000429277 ESR1P03372 595 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms