RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 RNF34Q969K3 372 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 FEM1CQ96JP0 617 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 MCMBPQ9BTE3 642 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 FUNDC2Q9BWH2 189 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 CDADC1Q9BWV3 514 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 VRTNQ9H8Y1 702 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 DNMT3LQ9UJW3 386 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 PLOD2O00469 737 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 UPK1BO75841 260 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 S100A6P06703 90 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 SAT1P21673 171 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 APLP1P51693 650 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 MCCD1P59942 119 aaPredicted RBP14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 RHDQ02161 417 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 PRKCZQ05513 592 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 GALEQ14376 348 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 KCNT2Q6UVM3 1135 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 CLYBLQ8N0X4 340 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 CPNE1Q99829 537 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 DHRS4Q9BTZ2 278 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 RNF103O00237 685 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 AXIN1O15169 862 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 SSX5O60225 188 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 ABCB7O75027 752 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 ATG7O95352 703 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 NDST3O95803 873 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 RPL17P18621 184 aaKnown RBP14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 PAMP19021 973 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 SLC6A3Q01959 620 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 SMG8Q8ND04 991 aaKnown RBP14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 ASB9Q96DX5 294 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 PPP1R2P1Q96PQ5 205 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 UCK2Q9BZX2 261 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 CDK5RAP2Q96SN8 1893 aa14.36□□□□□ -0.11
SYNGAP1-203ENST00000428982 DNAJC25-GNG10A0A024R161 153 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 PRSS51A0A1B0GVH4 220 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 SEPT4O43236 478 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 TOP3BO95985 862 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 GNAO1P09471 354 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 SOX6P35712 828 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 SLC25A11Q02978 314 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 PCBP1Q15365 356 aaKnown RBP eCLIP14.35□□□□□ -0.111e-6■■■■■ 27.3
SYNGAP1-203ENST00000428982 TSC22D1Q15714 1073 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 TFAP2CQ92754 450 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 GTSE1Q9NYZ3 720 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 VTI1BQ9UEU0 232 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 IPO11Q9UI26 975 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 HSPB11Q9Y547 144 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 TRPV2Q9Y5S1 764 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 TEX264Q9Y6I9 313 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 LOXHD1Q8IVV2 1947 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 DHRS12A0PJE2 317 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 YKT6O15498 198 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 FAM155BO75949 473 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 OR5F1O95221 314 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 GJB1P08034 283 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 DHRS4L1P0CG22 281 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 GTF2E2P29084 291 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 RPS9P46781 194 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 BTN2A1Q7KYR7 527 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 CCNYL1Q8N7R7 359 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 TNIP3Q96KP6 325 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 LHPPQ9H008 270 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 RAPGEFL1Q9UHV5 662 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 GOLGB1Q14789 3259 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 A8MUA0 341 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 SNAI1O95863 264 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 INHBBP09529 407 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 ARHGDIAP52565 204 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 CTAG1AP78358 180 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 KCNJ11Q14654 390 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 KIF19Q2TAC6 998 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 ZNF438Q7Z4V0 828 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 NAT16Q8N8M0 369 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 VPS39Q96JC1 886 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 TAS2R9Q9NYW1 312 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 GLTPQ9NZD2 209 aa14.35□□□□□ -0.11
SYNGAP1-203ENST00000428982 GRAP2O75791 330 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 SRP54P61011 504 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 MS4A2Q01362 244 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 GRSF1Q12849 480 aaKnown RBP eCLIP14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 TRAP1Q12931 704 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 CEACAM7Q14002 265 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 KIF18BQ86Y91 864 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 SLC6A15Q9H2J7 730 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 SPAG4Q9NPE6 437 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 SMIM35A0A1B0GVV1 85 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 ITGBL1O95965 494 aaPredicted RBP14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 CST3P01034 146 aaPredicted RBP14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 ETV4P43268 484 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 GDF10P55107 478 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 ABATP80404 500 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 CSTF3Q12996 717 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 DUSP7Q16829 419 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 BTBD16Q32M84 506 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 MAMDC4Q6UXC1 1216 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 NPNTQ6UXI9 565 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 PPP1R13LQ8WUF5 828 aa14.34□□□□□ -0.11
SYNGAP1-203ENST00000428982 HTR3CQ8WXA8 447 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms