RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 SLC9A6Q92581 669 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 LENG1Q96BZ8 264 aaPredicted RBP8.9□□□□□ -0.98
CTNND1-208ENST00000428599 RBM18Q96H35 190 aaKnown RBP8.9□□□□□ -0.98
CTNND1-208ENST00000428599 ZNF670Q9BS34 389 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 SNRNP25Q9BV90 132 aaKnown RBP8.9□□□□□ -0.98
CTNND1-208ENST00000428599 CCNB1IP1Q9NPC3 277 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 FKBP14Q9NWM8 211 aa8.9□□□□□ -0.98
CTNND1-208ENST00000428599 SLIT2O94813 1529 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 RIIAD1A6NNX1 92 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 BTN3A3O00478 584 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 FPGTO14772 594 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 AZIN1O14977 448 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 SNAP91O60641 907 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 KERAO60938 352 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 MRPS22P82650 360 aaKnown RBP8.9□□□□□ -0.99
CTNND1-208ENST00000428599 PLGLB1Q02325 96 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 DLK2Q6UY11 383 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 NUP54Q7Z3B4 507 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 FAM129CQ86XR2 697 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 CCDC36Q8IYA8 594 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 GJD3Q8N144 294 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 UPF1Q92900 1129 aaKnown RBP eCLIP8.9□□□□□ -0.996e-7■■□□□ 14.4
CTNND1-208ENST00000428599 MARK4Q96L34 752 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 SEC14L3Q9UDX4 400 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 PHF24Q9UPV7 400 aa8.9□□□□□ -0.99
CTNND1-208ENST00000428599 NRXN3Q9Y4C0 1643 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 GRXCR2A6NFK2 248 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 DUSP11O75319 330 aaKnown RBP8.89□□□□□ -0.99
CTNND1-208ENST00000428599 RLN1P04808 185 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 TSHRP16473 764 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 ABCG1P45844 678 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 RPS6KA3P51812 740 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 LCN9Q8WX39 176 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 POLR3HQ9Y535 204 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-208ENST00000428599 TREHO43280 583 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 ATP6V1G2O95670 118 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 NAGLUP54802 743 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 MAXP61244 160 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 PSME3P61289 254 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 RASGEF1BQ0VAM2 473 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 ZBTB6Q15916 424 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 SGCBQ16585 318 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 LRRC55Q6ZSA7 311 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 FAM92BQ6ZTR7 304 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 PIWIL4Q7Z3Z4 852 aaKnown RBP8.89□□□□□ -0.99
CTNND1-208ENST00000428599 FAM35AQ86V20 835 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 ZBTB2Q8N680 514 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 PRCCQ92733 491 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-208ENST00000428599 PMEPA1Q969W9 287 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 DUSP16Q9BY84 665 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 GNEQ9Y223 722 aaKnown RBP8.89□□□□□ -0.99
CTNND1-208ENST00000428599 FAM237AA0A1B0GTK4 181 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 FZD9O00144 591 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 LRIG2O94898 1065 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 CDK14O94921 469 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 LYPLA2O95372 231 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 SEC24AO95486 1093 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 CFIP05156 583 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 LINC00032P0C843 101 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 DBTP11182 482 aaKnown RBP8.89□□□□□ -0.99
CTNND1-208ENST00000428599 PTPN2P17706 415 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 AGXTP21549 392 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 GNALP38405 381 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 SPAM1P38567 509 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 ASMTP46597 345 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 TUSC3Q13454 348 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 PARP15Q460N3 678 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 C5orf22Q49AR2 442 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 LRRC38Q5VT99 294 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 MSANTD1Q6ZTZ1 278 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 MEIOBQ8N635 442 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 VANGL1Q8TAA9 524 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-208ENST00000428599 GPR152Q8TDT2 470 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 GAL3ST3Q96A11 431 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 BTN2A3PQ96KV6 586 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 MBOAT7Q96N66 472 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 DERAQ9Y315 318 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 C9J4A7 227 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 TRIM38O00635 465 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 ZNF432O94892 652 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 SEMA3DO95025 777 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 PIRTP0C851 137 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 SULT1C3Q6IMI6 304 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 GALNTL5Q7Z4T8 443 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 SLC9A9Q8IVB4 645 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 LIX1Q8N485 282 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 MSL3Q8N5Y2 521 aaKnown RBP8.89□□□□□ -0.99
CTNND1-208ENST00000428599 CHST4Q8NCG5 386 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 SLC22A17Q8WUG5 538 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 KCTD4Q8WVF5 259 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 PMM1Q92871 262 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 ABCG8Q9H221 673 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 CRTAC1Q9NQ79 661 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 RGS17Q9UGC6 210 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-208ENST00000428599 SAMD4AQ9UPU9 718 aaKnown RBP8.89□□□□□ -0.99
CTNND1-208ENST00000428599 ERCC2P18074 760 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 ITPKAP23677 461 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 EIF2S3P41091 472 aaKnown RBP8.89□□□□□ -0.99
CTNND1-208ENST00000428599 KCNJ5P48544 419 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 DUSP4Q13115 394 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms