RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 S100A9P06702 114 aaKnown RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 HMBSP08397 361 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 USP17L8P0C7I0 530 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZSCAN5DPP0CG00 497 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 RAP2AP10114 183 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 MTHFD1P11586 935 aaKnown RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 AKR1B1P15121 316 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF3P17036 446 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CKMT2P17540 419 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 NELFEP18615 380 aaKnown RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 MSH3P20585 1137 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CD72P21854 359 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CPN2P22792 545 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 PSMA2P25787 234 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 HTR1BP28222 390 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 UQCRC1P31930 480 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SHMT1P34896 483 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 HAAOP46952 286 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 QARSP47897 775 aaKnown RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ATP5OP48047 213 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 PPP3CCP48454 512 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CENPAP49450 140 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 STARP49675 285 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 GZMKP49863 264 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 DCDC1P59894 354 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SNAP25P60880 206 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 GPR85P60893 370 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ERVK-21P61565 698 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 PSMC5P62195 406 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 NOMO3P69849 1222 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 GTF2IP78347 998 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 RBP5P82980 135 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 GBE1Q04446 702 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CHRNB3Q05901 458 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 GRIK2Q13002 908 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC13A2Q13183 592 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ASAH1Q13510 395 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 GRAPQ13588 217 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SEMA5AQ13591 1074 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 NOMO1Q15155 1222 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 LLGL1Q15334 1064 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZYXQ15942 572 aaKnown RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 TAZQ16635 292 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 UBE2SQ16763 222 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CYP51A1Q16850 503 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 TRIM60Q495X7 471 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC9B1Q4ZJI4 515 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CLLU1Q5K131 121 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 HMBOX1Q6NT76 420 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF704Q6ZNC4 412 aaPredicted RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF600Q6ZNG1 722 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 Q6ZVU0 165 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 C16orf62Q7Z3J2 963 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZBTB33Q86T24 672 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SYVN1Q86TM6 617 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 OSTM1Q86WC4 334 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 PTRH1Q86Y79 214 aaKnown RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 HIPK1Q86Z02 1210 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 KSR1Q8IVT5 923 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ADHFE1Q8IWW8 467 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CPNE9Q8IYJ1 553 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ADGRG5Q8IZF4 528 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ABRAQ8N0Z2 381 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 EID3Q8N140 333 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CCNYL1Q8N7R7 359 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 KCTD6Q8NC69 237 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ADAM32Q8TC27 787 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SPATA18Q8TC71 538 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 TAS1R2Q8TE23 839 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 BCL7CQ8WUZ0 217 aaPredicted RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CANT1Q8WVQ1 401 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 DEDD2Q8WXF8 326 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 DDX1Q92499 740 aaKnown RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 KAT5Q92993 513 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC38A4Q969I6 547 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 OTULINQ96BN8 352 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 INTS12Q96CB8 462 aaKnown RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 LGALS12Q96DT0 336 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 YIPF6Q96EC8 236 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SGTBQ96EQ0 304 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 FBXL20Q96IG2 436 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ST6GAL2Q96JF0 529 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ART5Q96L15 291 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SIGLEC10Q96LC7 697 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 NSMCE2Q96MF7 247 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF778Q96MU6 729 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF300Q96RE9 604 aaPredicted RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLC30A2Q9BRI3 323 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZNF577Q9BSK1 485 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CINPQ9BW66 212 aaPredicted RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 TTLL2Q9BWV7 592 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 UCK2Q9BZX2 261 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 SLIRPQ9GZT3 109 aaKnown RBP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 DCSTAMPQ9H295 470 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 GAREM1Q9H706 876 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 ZFP14Q9HCL3 533 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 CD93Q9NPY3 652 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 IFT46Q9NQC8 304 aa5.58□□□□□ -1.52
VTI1BP4-201ENST00000427516 XPNPEP3Q9NQH7 507 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms