RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 CRCPO75575 148 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 RFPL2O75678 378 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 RPP40O75818 363 aaKnown RBP10.62□□□□□ -0.71
CUX1-205ENST00000425244 RHOBTB1O94844 696 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 OR6B1O95007 311 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 LRG1P02750 347 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 C8AP07357 584 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 TACR2P21452 398 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 FDXRP22570 491 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 FMO4P31512 558 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 FOXA1P55317 472 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 CDKL1Q00532 357 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 GRM2Q14416 872 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 ADCY4Q8NFM4 1077 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 OR4L1Q8NH43 312 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 PHOSPHO2Q8TCD6 241 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 PPWD1Q96BP3 646 aaKnown RBP10.62□□□□□ -0.71
CUX1-205ENST00000425244 RMDN1Q96DB5 314 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 SLC45A3Q96JT2 553 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 TRMOQ9BU70 441 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 TLR9Q9NR96 1032 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.62□□□□□ -0.71
CUX1-205ENST00000425244 CROTQ9UKG9 612 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 SNX13Q9Y5W8 968 aa10.62□□□□□ -0.71
CUX1-205ENST00000425244 FAM92AA1XBS5 289 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 ZNF840PA6NDX5 716 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 NCF1BA6NI72 391 aaPredicted RBP10.61□□□□□ -0.71
CUX1-205ENST00000425244 NCF1CA8MVU1 366 aaPredicted RBP10.61□□□□□ -0.71
CUX1-205ENST00000425244 F5H5T6 163 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 PIP5K1BO14986 540 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 COCHO43405 550 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 PRAMEF11O60813 436 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 LILRB3O75022 631 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 CDK14O94921 469 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 FGF1P05230 155 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 SERPINF2P08697 491 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 ALDOCP09972 364 aaKnown RBP10.61□□□□□ -0.71
CUX1-205ENST00000425244 NCF1P14598 390 aaPredicted RBP10.61□□□□□ -0.71
CUX1-205ENST00000425244 ZNF37AP17032 561 aaPredicted RBP10.61□□□□□ -0.71
CUX1-205ENST00000425244 HLA-DPA1P20036 260 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 ATP5C1P36542 298 aaKnown RBP10.61□□□□□ -0.71
CUX1-205ENST00000425244 SCNN1BP51168 640 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 INHBCP55103 352 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 CLYBLQ8N0X4 340 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 SPPL3Q8TCT6 385 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 LRTOMTQ8WZ04 291 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 RNF38Q9H0F5 515 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 ZNF334Q9HCZ1 680 aaPredicted RBP10.61□□□□□ -0.71
CUX1-205ENST00000425244 POLR3BQ9NW08 1133 aaPredicted RBP10.61□□□□□ -0.71
CUX1-205ENST00000425244 IL37Q9NZH6 218 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 SUCOQ9UBS9 1254 aaKnown RBP10.61□□□□□ -0.71
CUX1-205ENST00000425244 DNAJC15Q9Y5T4 150 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 CCDC160A6NGH7 325 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 ZNF839A8K0R7 811 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 DENRO43583 198 aaKnown RBP10.61□□□□□ -0.71
CUX1-205ENST00000425244 LINC00032P0C843 101 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 CYP4F8P98187 520 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 VPS26BQ4G0F5 336 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 TXNDC8Q6A555 127 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 LARP4Q71RC2 724 aaKnown RBP eCLIP10.61□□□□□ -0.713e-6■■□□□ 13.7
CUX1-205ENST00000425244 AMIGO2Q86SJ2 522 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 HS6ST3Q8IZP7 471 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 MARVELD2Q8N4S9 558 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 MRPL43Q8N983 215 aaKnown RBP10.61□□□□□ -0.71
CUX1-205ENST00000425244 KREMEN2Q8NCW0 462 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 TWIST2Q8WVJ9 160 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 BHMTQ93088 406 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 TUBGCP3Q96CW5 907 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 L3HYPDHQ96EM0 354 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 FEM1CQ96JP0 617 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 SLC22A12Q96S37 553 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 CORO1BQ9BR76 489 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 CCDC68Q9H2F9 335 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 SEMA4BQ9NPR2 832 aaPredicted RBP10.61□□□□□ -0.71
CUX1-205ENST00000425244 OLA1Q9NTK5 396 aaKnown RBP10.61□□□□□ -0.71
CUX1-205ENST00000425244 HCFC1R1Q9NWW0 138 aa10.61□□□□□ -0.71
CUX1-205ENST00000425244 A0A0J9YYE9 177 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 DRGXA6NNA5 263 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 AZIN1O14977 448 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 WISP3O95389 354 aaPredicted RBP10.6□□□□□ -0.71
CUX1-205ENST00000425244 GLUD1P00367 558 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 GABRR2P28476 465 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 RPS24P62847 133 aaKnown RBP10.6□□□□□ -0.71
CUX1-205ENST00000425244 TIAL1Q01085 375 aaKnown RBP eCLIP10.6□□□□□ -0.71
CUX1-205ENST00000425244 GRB7Q14451 532 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 RPS6KA2Q15349 733 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 HECTD3Q5T447 861 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 MFSD4BQ5TF39 518 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 GALNT7Q86SF2 657 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 TCEAL8Q8IYN2 117 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 TMEM102Q8N9M5 508 aaPredicted RBP10.6□□□□□ -0.71
CUX1-205ENST00000425244 BRSK1Q8TDC3 778 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 FATE1Q969F0 183 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 LRCH3Q96II8 777 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 EMILIN2Q9BXX0 1053 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 MRPL40Q9NQ50 206 aaKnown RBP10.6□□□□□ -0.71
CUX1-205ENST00000425244 DNMT3LQ9UJW3 386 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 RAB26Q9ULW5 256 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 RNF112Q9ULX5 631 aa10.6□□□□□ -0.71
CUX1-205ENST00000425244 LZTS1Q9Y250 596 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms