RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 FAM228BP0C875 321 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 ZNF28P17035 718 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 PBX1P40424 430 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 ZNF165P49910 485 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 IFI16Q16666 785 aaKnown RBP14.81□□□□□ -0.04
ATG4B-209ENST00000425239 ANKRD20A8PQ5CZ79 823 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 SNAP47Q5SQN1 464 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 FAM182AQ5T1J6 154 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 LYSMD3Q7Z3D4 306 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.81□□□□□ -0.04
ATG4B-209ENST00000425239 ABHD17AQ96GS6 310 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 PLEKHG4BQ96PX9 1271 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 TRIB3Q96RU7 358 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 NUP85Q9BW27 656 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 CARD9Q9H257 536 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 FAM83DQ9H4H8 585 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 GPN2Q9H9Y4 310 aaPredicted RBP14.81□□□□□ -0.04
ATG4B-209ENST00000425239 PRDM8Q9NQV8 689 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 CPNE7Q9UBL6 633 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 SLC23A2Q9UGH3 650 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 ANAPC7Q9UJX3 599 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 SLC30A1Q9Y6M5 507 aa14.81□□□□□ -0.04
ATG4B-209ENST00000425239 MN1Q10571 1320 aaPredicted RBP14.81□□□□□ -0.04
ATG4B-209ENST00000425239 KIR2DS5A0A0G2JLQ3 304 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 A0A0G2JNG1 304 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 RGSL1A5PLK6 1076 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 K7EM74 188 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 KIR2DS3K7RE56 304 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 CHUKO15111 745 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 ACP5P13686 325 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 ZNF8P17098 575 aaPredicted RBP14.8□□□□□ -0.04
ATG4B-209ENST00000425239 XRCC1P18887 633 aaPredicted RBP14.8□□□□□ -0.04
ATG4B-209ENST00000425239 STAT5AP42229 794 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 GBE1Q04446 702 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 CDC20Q12834 499 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 UBAP2LQ14157 1087 aaKnown RBP14.8□□□□□ -0.04
ATG4B-209ENST00000425239 MAP7Q14244 749 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 KIR2DS5Q14953 304 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 IQCB1Q15051 598 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 CCDC183Q5T5S1 534 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 ZNF648Q5T619 568 aaPredicted RBP14.8□□□□□ -0.04
ATG4B-209ENST00000425239 ATP1A1-AS1Q5TC04 95 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 SYN2Q92777 582 aaPredicted RBP14.8□□□□□ -0.04
ATG4B-209ENST00000425239 SH3KBP1Q96B97 665 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 HERPUD2Q9BSE4 406 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 UCK1Q9HA47 277 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 ZNF71Q9NQZ8 489 aaPredicted RBP14.8□□□□□ -0.04
ATG4B-209ENST00000425239 ZNF624Q9P2J8 865 aaPredicted RBP14.8□□□□□ -0.04
ATG4B-209ENST00000425239 ANKMY1Q9P2S6 941 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 ANAPC2Q9UJX6 822 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 DNPEPQ9ULA0 475 aa14.8□□□□□ -0.04
ATG4B-209ENST00000425239 USP9YO00507 2555 aaPredicted RBP14.8□□□□□ -0.04
ATG4B-209ENST00000425239 USP9XQ93008 2570 aaPredicted RBP14.8□□□□□ -0.04
ATG4B-209ENST00000425239 C1orf232A0A0U1RR37 186 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 LILRA5A6NI73 299 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 OR5K4A6NMS3 321 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 POLR1CO15160 346 aaPredicted RBP14.79□□□□□ -0.04
ATG4B-209ENST00000425239 GRID2O43424 1007 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 FURINP09958 794 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 SLC19A1P41440 591 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 EPHB1P54762 984 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 GFERP55789 205 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 TAS2R40P59535 323 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 KRT81Q14533 505 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 CCDC122Q5T0U0 273 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 TIGD7Q6NT04 549 aaPredicted RBP14.79□□□□□ -0.04
ATG4B-209ENST00000425239 SLC9B2Q86UD5 537 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 GPR26Q8NDV2 337 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 LPCAT1Q8NF37 534 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 TADA1Q96BN2 335 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 C9orf72Q96LT7 481 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 ZNF670Q9BS34 389 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 MLPHQ9BV36 600 aaPredicted RBP14.79□□□□□ -0.04
ATG4B-209ENST00000425239 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.79□□□□□ -0.04
ATG4B-209ENST00000425239 TRIT1Q9H3H1 467 aaKnown RBP14.79□□□□□ -0.04
ATG4B-209ENST00000425239 EPB41L1Q9H4G0 881 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 TRIM39Q9HCM9 518 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 TMPRSS11EQ9UL52 423 aa14.79□□□□□ -0.04
ATG4B-209ENST00000425239 MRPS18BQ9Y676 258 aaKnown RBP14.79□□□□□ -0.04
ATG4B-209ENST00000425239 BZW2Q9Y6E2 419 aaKnown RBP14.79□□□□□ -0.04
ATG4B-209ENST00000425239 ZNF106Q9H2Y7 1883 aaKnown RBP14.78□□□□□ -0.04
ATG4B-209ENST00000425239 A0A1W2PQJ5 194 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 GOLGA6L3A6NEY3 463 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 MYO1FO00160 1098 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 SNX2O60749 519 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 PRKAR1AP10644 381 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 BRAFP15056 766 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 DEFB109BQ30KR1 87 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 FILIP1LQ4L180 1135 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 TMC3Q7Z5M5 1100 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 ADGRG6Q86SQ4 1221 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 ZNF547Q8IVP9 402 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 C9orf43Q8TAL5 461 aaPredicted RBP14.78□□□□□ -0.04
ATG4B-209ENST00000425239 APOBEC4Q8WW27 367 aaKnown RBP14.78□□□□□ -0.04
ATG4B-209ENST00000425239 STARD8Q92502 1023 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 HDAC11Q96DB2 347 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 EFHD1Q9BUP0 239 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 ARFGAP3Q9NP61 516 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 KLHL3Q9UH77 587 aa14.78□□□□□ -0.04
ATG4B-209ENST00000425239 KCNMB2Q9Y691 235 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms