RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ZNF648Q5T619 568 aaPredicted RBP15.05■□□□□ -0
USB1-202ENST00000423271 ARHGAP40Q5TG30 622 aa15.05■□□□□ -0
USB1-202ENST00000423271 NKAIN2Q5VXU1 208 aa15.05■□□□□ -0
USB1-202ENST00000423271 USP53Q70EK8 1073 aa15.05■□□□□ -0
USB1-202ENST00000423271 ZNF761Q86XN6 746 aaPredicted RBP15.05■□□□□ -0
USB1-202ENST00000423271 GPR26Q8NDV2 337 aa15.05■□□□□ -0
USB1-202ENST00000423271 SLC37A2Q8TED4 501 aa15.05■□□□□ -0
USB1-202ENST00000423271 TEKT5Q96M29 485 aa15.05■□□□□ -0
USB1-202ENST00000423271 ZFYVE1Q9HBF4 777 aa15.05■□□□□ -0
USB1-202ENST00000423271 UBP1Q9NZI7 540 aa15.05■□□□□ -0
USB1-202ENST00000423271 ZNHIT2Q9UHR6 403 aa15.05■□□□□ -0
USB1-202ENST00000423271 SSUH2Q9Y2M2 353 aa15.05■□□□□ -0
USB1-202ENST00000423271 PPP2R2CQ9Y2T4 447 aa15.05■□□□□ -0
USB1-202ENST00000423271 PCDHGA7Q9Y5G6 932 aa15.05■□□□□ -0
USB1-202ENST00000423271 SPO11Q9Y5K1 396 aa15.05■□□□□ -0
USB1-202ENST00000423271 CAPN6Q9Y6Q1 641 aa15.05■□□□□ -0
USB1-202ENST00000423271 hCG_1818297A0A087WSY0 165 aa15.04■□□□□ -0
USB1-202ENST00000423271 TEX51A0A1B0GUA7 166 aa15.04■□□□□ -0
USB1-202ENST00000423271 RGSL1A5PLK6 1076 aa15.04■□□□□ -0
USB1-202ENST00000423271 F5H423 210 aaPredicted RBP15.04■□□□□ -0
USB1-202ENST00000423271 ATXN7O15265 892 aaPredicted RBP15.04■□□□□ -0
USB1-202ENST00000423271 KRT86O43790 486 aa15.04■□□□□ -0
USB1-202ENST00000423271 PMPCBO75439 489 aa15.04■□□□□ -0
USB1-202ENST00000423271 FTCDO95954 541 aa15.04■□□□□ -0
USB1-202ENST00000423271 ACP5P13686 325 aa15.04■□□□□ -0
USB1-202ENST00000423271 CD1CP29017 333 aa15.04■□□□□ -0
USB1-202ENST00000423271 CSF2RBP32927 897 aa15.04■□□□□ -0
USB1-202ENST00000423271 CTNNA1P35221 906 aaKnown RBP15.04■□□□□ -0
USB1-202ENST00000423271 NR2C2P49116 596 aa15.04■□□□□ -0
USB1-202ENST00000423271 UCNP55089 124 aa15.04■□□□□ -0
USB1-202ENST00000423271 LRP8Q14114 963 aa15.04■□□□□ -0
USB1-202ENST00000423271 NOMO1Q15155 1222 aa15.04■□□□□ -0
USB1-202ENST00000423271 SLC14A2Q15849 920 aa15.04■□□□□ -0
USB1-202ENST00000423271 PCSK4Q6UW60 755 aa15.04■□□□□ -0
USB1-202ENST00000423271 ZNF574Q6ZN55 896 aaPredicted RBP15.04■□□□□ -0
USB1-202ENST00000423271 CHST15Q7LFX5 561 aaPredicted RBP15.04■□□□□ -0
USB1-202ENST00000423271 PIM3Q86V86 326 aa15.04■□□□□ -0
USB1-202ENST00000423271 KATNAL2Q8IYT4 538 aa15.04■□□□□ -0
USB1-202ENST00000423271 RNF10Q8N5U6 811 aaKnown RBP15.04■□□□□ -0
USB1-202ENST00000423271 RCBTB1Q8NDN9 531 aa15.04■□□□□ -0
USB1-202ENST00000423271 TFB1MQ8WVM0 346 aaKnown RBP15.04■□□□□ -0
USB1-202ENST00000423271 SPATA16Q9BXB7 569 aa15.04■□□□□ -0
USB1-202ENST00000423271 LZTFL1Q9NQ48 299 aa15.04■□□□□ -0
USB1-202ENST00000423271 KCNK6Q9Y257 313 aa15.04■□□□□ -0
USB1-202ENST00000423271 IGHV1OR21-1A0A087WYE8 117 aa15.03■□□□□ -0
USB1-202ENST00000423271 PRAMEF33A0A0G2JMD5 474 aa15.03■□□□□ -0
USB1-202ENST00000423271 IGHV5-10-1A0A0J9YXX1 117 aa15.03■□□□□ -0
USB1-202ENST00000423271 EIF4E1BA6NMX2 242 aaKnown RBP15.03■□□□□ -0
USB1-202ENST00000423271 AURKAO14965 403 aa15.03■□□□□ -0
USB1-202ENST00000423271 PRAMEF10O60809 474 aa15.03■□□□□ -0
USB1-202ENST00000423271 NDST3O95803 873 aa15.03■□□□□ -0
USB1-202ENST00000423271 NFKB1P19838 968 aa15.03■□□□□ -0
USB1-202ENST00000423271 CTNNA2P26232 953 aa15.03■□□□□ -0
USB1-202ENST00000423271 GPR3P46089 330 aa15.03■□□□□ -0
USB1-202ENST00000423271 CFHR1Q03591 330 aa15.03■□□□□ -0
USB1-202ENST00000423271 PEX6Q13608 980 aa15.03■□□□□ -0
USB1-202ENST00000423271 TGIF1Q15583 401 aa15.03■□□□□ -0
USB1-202ENST00000423271 TFDP3Q5H9I0 405 aa15.03■□□□□ -0
USB1-202ENST00000423271 ZNF569Q5MCW4 686 aa15.03■□□□□ -0
USB1-202ENST00000423271 ZNF662Q6ZS27 426 aa15.03■□□□□ -0
USB1-202ENST00000423271 TMC3Q7Z5M5 1100 aa15.03■□□□□ -0
USB1-202ENST00000423271 ZC3H18Q86VM9 953 aaKnown RBP15.03■□□□□ -0
USB1-202ENST00000423271 CCDC50Q8IVM0 306 aa15.03■□□□□ -0
USB1-202ENST00000423271 SYCE1Q8N0S2 351 aa15.03■□□□□ -0
USB1-202ENST00000423271 SFRP1Q8N474 314 aa15.03■□□□□ -0
USB1-202ENST00000423271 SLC39A7Q92504 469 aa15.03■□□□□ -0
USB1-202ENST00000423271 CCDC97Q96F63 343 aaPredicted RBP15.03■□□□□ -0
USB1-202ENST00000423271 CCDC74BQ96LY2 380 aa15.03■□□□□ -0
USB1-202ENST00000423271 GPR63Q9BZJ6 419 aa15.03■□□□□ -0
USB1-202ENST00000423271 MAGEE1Q9HCI5 957 aa15.03■□□□□ -0
USB1-202ENST00000423271 WDR70Q9NW82 654 aa15.03■□□□□ -0
USB1-202ENST00000423271 FOXJ2Q9P0K8 574 aa15.03■□□□□ -0
USB1-202ENST00000423271 TMEM9Q9P0T7 183 aa15.03■□□□□ -0
USB1-202ENST00000423271 ATXN10Q9UBB4 475 aa15.03■□□□□ -0
USB1-202ENST00000423271 TBC1D29Q9UFV1 150 aa15.03■□□□□ -0
USB1-202ENST00000423271 AMFRQ9UKV5 643 aa15.03■□□□□ -0
USB1-202ENST00000423271 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.03■□□□□ -0
USB1-202ENST00000423271 PCDHA3Q9Y5H8 950 aa15.03■□□□□ -0
USB1-202ENST00000423271 CCDC66A2RUB6 948 aa15.02■□□□□ -0
USB1-202ENST00000423271 A6NCN8 305 aa15.02■□□□□ -0
USB1-202ENST00000423271 NUAK1O60285 661 aa15.02■□□□□ -0
USB1-202ENST00000423271 ZRANB2O95218 330 aaKnown RBP eCLIP15.02■□□□□ -0
USB1-202ENST00000423271 CCL4P13236 92 aa15.02■□□□□ -0
USB1-202ENST00000423271 ZNF8P17098 575 aaPredicted RBP15.02■□□□□ -0
USB1-202ENST00000423271 BPIP17213 487 aa15.02■□□□□ -0
USB1-202ENST00000423271 MPSTP25325 297 aa15.02■□□□□ -0
USB1-202ENST00000423271 CHRNA4P43681 627 aa15.02■□□□□ -0
USB1-202ENST00000423271 FASLGP48023 281 aa15.02■□□□□ -0
USB1-202ENST00000423271 MAPK10P53779 464 aa15.02■□□□□ -0
USB1-202ENST00000423271 DCDC1P59894 354 aa15.02■□□□□ -0
USB1-202ENST00000423271 VAC14Q08AM6 782 aa15.02■□□□□ -0
USB1-202ENST00000423271 SRSF6Q13247 344 aaKnown RBP15.02■□□□□ -0
USB1-202ENST00000423271 KDELC1Q6UW63 502 aa15.02■□□□□ -0
USB1-202ENST00000423271 BZW1Q7L1Q6 419 aaKnown RBP15.02■□□□□ -0
USB1-202ENST00000423271 PEX26Q7Z412 305 aa15.02■□□□□ -0
USB1-202ENST00000423271 ZNF567Q8N184 647 aa15.02■□□□□ -0
USB1-202ENST00000423271 TRAM1L1Q8N609 369 aa15.02■□□□□ -0
USB1-202ENST00000423271 P3H4Q92791 437 aa15.02■□□□□ -0
USB1-202ENST00000423271 USP7Q93009 1102 aa15.02■□□□□ -0
USB1-202ENST00000423271 TMEM159Q96B96 161 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms