RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 MFSD11O43934 449 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 ANKRD34CP0C6C1 535 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 SKILP12757 684 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 GP1BBP13224 206 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 CCNCP24863 283 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 CLCNKAP51800 687 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 MMRN1Q13201 1228 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 PAFAH1B3Q15102 231 aaKnown RBP16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 IFI16Q16666 785 aaKnown RBP16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 LACTB2Q53H82 288 aaPredicted RBP16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 CCDC122Q5T0U0 273 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 C16orf46Q6P387 395 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 LPCAT1Q8NF37 534 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 TSGA13Q96PP4 275 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 TBC1D10AQ9BXI6 508 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 CARD9Q9H257 536 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 PCDH9Q9HC56 1237 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 SIDT1Q9NXL6 827 aaKnown RBP16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 IP6K2Q9UHH9 426 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 KCTD3Q9Y597 815 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 RPS6KL1Q9Y6S9 549 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 ZNF106Q9H2Y7 1883 aaKnown RBP16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 FLNCQ14315 2725 aa16.67■□□□□ 0.26
UPF3AP3-201ENST00000420996 C1orf232A0A0U1RR37 186 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 RGSL1A5PLK6 1076 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 GRID2O43424 1007 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 NUAK1O60285 661 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 C9P02748 559 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 NIPAL4Q0D2K0 466 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 FILIP1LQ4L180 1135 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 ANKRD20A8PQ5CZ79 823 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 PHYKPLQ8IUZ5 450 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 CCHCR1Q8TD31 782 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 BTBD6Q96KE9 485 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 C9orf72Q96LT7 481 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 UCK1Q9HA47 277 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 PRDM8Q9NQV8 689 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 PKD2L2Q9NZM6 624 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 TTLL3Q9Y4R7 772 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 PCDHB3Q9Y5E6 796 aa16.66■□□□□ 0.26
UPF3AP3-201ENST00000420996 PRR19A6NJB7 356 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 CD48P09326 243 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 XRCC1P18887 633 aaPredicted RBP16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 F8A1P23610 371 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 ARSEP51690 589 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 UBE2IP63279 158 aaKnown RBP16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 KLRB1Q12918 225 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 ATP1A1-AS1Q5TC04 95 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 NCBP2-AS2Q69YL0 99 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 PLEKHG4BQ96PX9 1271 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 MLPHQ9BV36 600 aaPredicted RBP16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 ULBP3Q9BZM4 244 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 OGFRQ9NZT2 677 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 ATXN10Q9UBB4 475 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 ANAPC7Q9UJX3 599 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 ADGRG1Q9Y653 693 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 MRPS18BQ9Y676 258 aaKnown RBP16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 KCNMB2Q9Y691 235 aa16.65■□□□□ 0.26
UPF3AP3-201ENST00000420996 ANKRD66B4E2M5 251 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 TOX3O15405 576 aaPredicted RBP16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 ZNF8P17098 575 aaPredicted RBP16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 GFERP55789 205 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 FOXM1Q08050 763 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 DPYSL3Q14195 570 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 QPCTQ16769 361 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 HADHQ16836 314 aaKnown RBP16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 CCDC183Q5T5S1 534 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 C6orf15Q6UXA7 325 aaPredicted RBP16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 TMEM26Q6ZUK4 368 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 FAM26EQ8N5C1 309 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 NUP85Q9BW27 656 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 NAT10Q9H0A0 1025 aaKnown RBP16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 THAP2Q9H0W7 228 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 PLAAQ9Y263 795 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 TP53TG5Q9Y2B4 290 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 MAN2B2Q9Y2E5 1009 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 NBASA2RRP1 2371 aa16.64■□□□□ 0.25
UPF3AP3-201ENST00000420996 GPR89AB7ZAQ6 455 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 MYO1FO00160 1098 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 UBXN7O94888 489 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 SLC25A14O95258 325 aaPredicted RBP16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 HLA-DQB2P05538 268 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 GPR89BP0CG08 455 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 ZNF28P17035 718 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 DLSTP36957 453 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 SSR1P43307 286 aaKnown RBP16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 IL11RAQ14626 422 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 TCTN3Q6NUS6 607 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 MIB2Q96AX9 1013 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 ADGRE3Q9BY15 652 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 OR2AG1Q9H205 316 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 OSGEPL1Q9H4B0 414 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 TRIM39Q9HCM9 518 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 KLC4Q9NSK0 619 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 CROTQ9UKG9 612 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 BZW2Q9Y6E2 419 aaKnown RBP16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 SLC30A1Q9Y6M5 507 aa16.63■□□□□ 0.25
UPF3AP3-201ENST00000420996 A0A1B0GTH6 734 aa16.62■□□□□ 0.25
UPF3AP3-201ENST00000420996 MKRN2OSH3BPM6 223 aa16.62■□□□□ 0.25
UPF3AP3-201ENST00000420996 CHUKO15111 745 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms