RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 S1PR5Q9H228 398 aa4.12□□□□□ -1.75
PTPN22-202ENST00000420377 TLE6Q9H808 572 aa4.12□□□□□ -1.75
PTPN22-202ENST00000420377 UNKLQ9H9P5 680 aaKnown RBP4.12□□□□□ -1.75
PTPN22-202ENST00000420377 TMBIM4Q9HC24 238 aa4.12□□□□□ -1.75
PTPN22-202ENST00000420377 EPB41L5Q9HCM4 733 aa4.12□□□□□ -1.75
PTPN22-202ENST00000420377 CD320Q9NPF0 282 aa4.12□□□□□ -1.75
PTPN22-202ENST00000420377 IFT46Q9NQC8 304 aa4.12□□□□□ -1.75
PTPN22-202ENST00000420377 EXD2Q9NVH0 621 aa4.12□□□□□ -1.75
PTPN22-202ENST00000420377 UBP1Q9NZI7 540 aa4.12□□□□□ -1.75
PTPN22-202ENST00000420377 CFAP97Q9P2B7 532 aa4.12□□□□□ -1.75
PTPN22-202ENST00000420377 RSL24D1Q9UHA3 163 aaKnown RBP4.12□□□□□ -1.75
PTPN22-202ENST00000420377 NFU1Q9UMS0 254 aa4.12□□□□□ -1.75
PTPN22-202ENST00000420377 FZD1Q9UP38 647 aa4.12□□□□□ -1.75
PTPN22-202ENST00000420377 ZFR2Q9UPR6 939 aaKnown RBP4.12□□□□□ -1.75
PTPN22-202ENST00000420377 CRYL1Q9Y2S2 319 aa4.12□□□□□ -1.75
PTPN22-202ENST00000420377 PCDHGA9Q9Y5G4 932 aaKnown RBP4.12□□□□□ -1.75
PTPN22-202ENST00000420377 PCDHGA5Q9Y5G8 931 aa4.12□□□□□ -1.75
PTPN22-202ENST00000420377 IGKV6D-41A0A0C4DH26 115 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 A0A1W2PRG6 482 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 MEI4A8MW99 385 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 FOXO6A8MYZ6 492 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 ZNF487B1APH4 448 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 CLDN4O14493 209 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 CRCPO75575 148 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 BCAR3O75815 825 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 CRYABP02511 175 aaKnown RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 ANXA1P04083 346 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 SNRNP70P08621 437 aaKnown RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 CNPP09543 421 aaKnown RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 SMIM18P0DKX4 95 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 NR2F1P10589 423 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 GM2AP17900 193 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 SLC1A4P43007 532 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 RAB13P51153 203 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 SLC12A3P55017 1021 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 AP1S1P61966 158 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 MAT1AQ00266 395 aaKnown RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 TOP3AQ13472 1001 aaPredicted RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 DYRK1AQ13627 763 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 DDX39BQ13838 428 aaKnown RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 MFSD13AQ14CX5 517 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 CDK10Q15131 360 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 EPC2Q52LR7 807 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 NANOGP8Q6NSW7 305 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 TAPT1Q6NXT6 567 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 VITQ6UXI7 678 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 RNF207Q6ZRF8 634 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 ASCL5Q7RTU5 278 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 ZNF572Q7Z3I7 529 aaPredicted RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 R3HCC1LQ7Z5L2 792 aaKnown RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 CAMKMTQ7Z624 323 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 MICU3Q86XE3 530 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 PHC2Q8IXK0 858 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 OR8H3Q8N146 312 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 CYP4Z2PQ8N1L4 340 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 UBL4BQ8N7F7 174 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 C8orf58Q8NAV2 365 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 SPATA4Q8NEY3 305 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 VN1R2Q8NFZ6 395 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 ZNF671Q8TAW3 534 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 CPT1BQ92523 772 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 CENPIQ92674 756 aaPredicted RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 UFD1Q92890 307 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 PTP4A1Q93096 173 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 MTFMTQ96DP5 389 aaKnown RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 KAZALD1Q96I82 304 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 NT5C1BQ96P26 610 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 FCRL4Q96PJ5 515 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 CDC6Q99741 560 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 SLC25A23Q9BV35 468 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 EDEM2Q9BV94 578 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 STRA6Q9BX79 667 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 BBS2Q9BXC9 721 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 TXLNGYQ9BZA5 131 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 C1orf21Q9H246 121 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 PPA2Q9H2U2 334 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 TRIT1Q9H3H1 467 aaKnown RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 RIMS4Q9H426 269 aaPredicted RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 KLHL1Q9NR64 748 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 KLHL11Q9NVR0 708 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 NSMCE4AQ9NXX6 385 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 GDE1Q9NZC3 331 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 EIF3KQ9UBQ5 218 aaKnown RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 CNOT11Q9UKZ1 510 aaKnown RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 IRAK3Q9Y616 596 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 AHRRA9YTQ3 701 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 KCNJ18B7U540 433 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 MSI1O43347 362 aaKnown RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 HS6ST1O60243 411 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 GPX5O75715 221 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 RECQL4O94761 1208 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 GJB6O95452 261 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 AFPP02771 609 aaKnown RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 CELA3AP09093 270 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 GNAO1P09471 354 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 SRGAP2CP0DJJ0 459 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 RALAP11233 206 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 FDPSP14324 419 aaKnown RBP4.11□□□□□ -1.75
PTPN22-202ENST00000420377 IL9P15248 144 aa4.11□□□□□ -1.75
PTPN22-202ENST00000420377 SMPD1P17405 629 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms