RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 CNOT8Q9UFF9 292 aaKnown RBP10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 PCSK1NQ9UHG2 260 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 DACH1Q9UI36 760 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 KCND3Q9UK17 655 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 CNOT6Q9ULM6 557 aaKnown RBP10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 KCNK6Q9Y257 313 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 MAP4K5Q9Y4K4 846 aa10.09□□□□□ -0.79
TNFAIP3-202ENST00000420009 DOPEY1Q5JWR5 2465 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 A0A0J9YYE9 177 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 CDC14CA4D256 554 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 KIAA0754O94854 1291 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 NDUFA10O95299 355 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 TRBC1P01850 177 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 ATP1A1P05023 1023 aaKnown RBP10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 FGF5P12034 268 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 ACP5P13686 325 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 MIPP30301 263 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 GARSP41250 739 aaKnown RBP10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 SH3BP2P78314 561 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 FOXM1Q08050 763 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 SEMA5AQ13591 1074 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 DNASE1L3Q13609 305 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 KRT31Q15323 416 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 CDKAL1Q5VV42 579 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 PLEKHA7Q6IQ23 1121 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 ACAD10Q6JQN1 1059 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 RAVER1Q8IY67 606 aaKnown RBP10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 BBS5Q8N3I7 341 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 OR6C1Q96RD1 312 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 WDR24Q96S15 920 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 SYT11Q9BT88 431 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 TRIM7Q9C029 511 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 TWSG1Q9GZX9 223 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 BRD8Q9H0E9 1235 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 RMI1Q9H9A7 625 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 MLXIPLQ9NP71 852 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 ETNK2Q9NVF9 386 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 ZNHIT2Q9UHR6 403 aa10.08□□□□□ -0.8
TNFAIP3-202ENST00000420009 SHANK1Q9Y566 2161 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 A1L4Q6 167 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 PIPSLA2A3N6 862 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 TMEM191CA6NGB0 347 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 OR5K4A6NMS3 321 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 FADS2P1A8MWK0 482 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 C21orf140B9A014 251 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 PRPSAP2O60256 369 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 SNX2O60749 519 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 LRCH4O75427 683 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 KATNA1O75449 491 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 ASMTLO95671 621 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 DDAH2O95865 285 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 MMP13P45452 471 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 LEPRP48357 1165 aaKnown RBP10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 CLCNKAP51800 687 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 PGDP52209 483 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 CDH6P55285 790 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 IHHQ14623 411 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 DPYSL2Q16555 572 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 NADK2Q4G0N4 442 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 HENMT1Q5T8I9 393 aaKnown RBP10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 MARC1Q5VT66 337 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 PAPD7Q5XG87 772 aaKnown RBP10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 CPZQ66K79 652 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 ALG1LQ6GMV1 187 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 TMCO3Q6UWJ1 677 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 TMEM26Q6ZUK4 368 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 PRSS42Q7Z5A4 293 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 PHYKPLQ8IUZ5 450 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 ATPAF2Q8N5M1 289 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 TEX26Q8N6G2 289 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 CT55Q8WUE5 264 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 TGM7Q96PF1 710 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 PLEKHG4BQ96PX9 1271 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 CLSTN2Q9H4D0 955 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 ACTL8Q9H568 366 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 ZWILCHQ9H900 591 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 PARVAQ9NVD7 372 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 TAS2R14Q9NYV8 317 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 LNPEPQ9UIQ6 1025 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 DNPEPQ9ULA0 475 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 PCDHGA9Q9Y5G4 932 aaKnown RBP10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 ADGRG1Q9Y653 693 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 SLC30A1Q9Y6M5 507 aa10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 TEP1Q99973 2627 aaKnown RBP10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 RP1L1Q8IWN7 2480 aaPredicted RBP10.07□□□□□ -0.8
TNFAIP3-202ENST00000420009 ABCA12Q86UK0 2595 aa10.06□□□□□ -0.8
TNFAIP3-202ENST00000420009 H3BRJ5 948 aa10.06□□□□□ -0.8
TNFAIP3-202ENST00000420009 LCE2BO14633 110 aa10.06□□□□□ -0.8
TNFAIP3-202ENST00000420009 NUAK1O60285 661 aa10.06□□□□□ -0.8
TNFAIP3-202ENST00000420009 SPAG6O75602 509 aa10.06□□□□□ -0.8
TNFAIP3-202ENST00000420009 RNF8O76064 485 aa10.06□□□□□ -0.8
TNFAIP3-202ENST00000420009 UBXN7O94888 489 aa10.06□□□□□ -0.8
TNFAIP3-202ENST00000420009 TIAF1O95411 115 aa10.06□□□□□ -0.8
TNFAIP3-202ENST00000420009 ATP1A3P13637 1013 aa10.06□□□□□ -0.8
TNFAIP3-202ENST00000420009 TYRP1P17643 537 aa10.06□□□□□ -0.8
TNFAIP3-202ENST00000420009 CASP14P31944 242 aa10.06□□□□□ -0.8
TNFAIP3-202ENST00000420009 LAMB3Q13751 1172 aa10.06□□□□□ -0.8
TNFAIP3-202ENST00000420009 UGT8Q16880 541 aa10.06□□□□□ -0.8
TNFAIP3-202ENST00000420009 CT47A1Q5JQC4 288 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms