RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 PLIN5Q00G26 463 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 CD47Q08722 323 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 TTLL4Q14679 1199 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 POU6F1Q14863 301 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 HABP4Q5JVS0 413 aaKnown RBP14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 HACD2Q6Y1H2 254 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 SLC26A9Q7LBE3 791 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 SLC22A15Q8IZD6 547 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 TTC16Q8NEE8 873 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 KHSRPQ92945 711 aaKnown RBP eCLIP14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 C19orf60Q96EN9 201 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 ITCHQ96J02 903 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 DEPDC7Q96QD5 511 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 CXCL16Q9H2A7 254 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 CDHR5Q9HBB8 845 aa14.64□□□□□ -0.07
NCKIPSD-204ENST00000416649 A8MT66 165 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 MSCO60682 206 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 CRYZL1O95825 349 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 PFKMP08237 780 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 ALDH3A2P51648 485 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 IL1RL1Q01638 556 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 TNFAIP2Q03169 654 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 UGT3A2Q3SY77 523 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 IRAK1BP1Q5VVH5 260 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 KDELC2Q7Z4H8 507 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 MFSD6LQ8IWD5 586 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 CELF2-AS1Q8N7Q2 184 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 GPR78Q96P69 363 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 CITED4Q96RK1 184 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 MRPL57Q9BQC6 102 aaKnown RBP14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 CLSTN3Q9BQT9 956 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 RPF1Q9H9Y2 349 aaKnown RBP14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 C8orf4Q9NR00 106 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 ZNF221Q9UK13 617 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 AKT3Q9Y243 479 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 CAB39Q9Y376 341 aaPredicted RBP14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 N6AMT1Q9Y5N5 214 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 DNAJC25-GNG10A0A024R161 153 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 PDZK1P1A8MUH7 402 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 AGRPO00253 132 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 SLC22A1O15245 554 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 ICMTO60725 284 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 UPK1BO75841 260 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 SOAT2O75908 522 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 AP2A1O95782 977 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 INSRRP14616 1297 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 ITIH1P19827 911 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 HUNKP57058 714 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 LAPTM5Q13571 262 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 GRB7Q14451 532 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 SURF1Q15526 300 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 CEP78Q5JTW2 689 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 PRMT9Q6P2P2 845 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 P2RY8Q86VZ1 359 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 MIER2Q8N344 545 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 HDAC2Q92769 488 aaKnown RBP14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 TUBGCP3Q96CW5 907 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 REXO4Q9GZR2 422 aaKnown RBP14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 IRF2BPLQ9H1B7 796 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 MRGBPQ9NV56 204 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 ABCD2Q9UBJ2 740 aa14.63□□□□□ -0.07
NCKIPSD-204ENST00000416649 FAM172BPA6NC97 362 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 GOLGA8CPA6NN73 597 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 TTC34A8MYJ7 566 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 CENPBD1B2RD01 187 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 ZBTB42B2RXF5 422 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 GNGT2O14610 69 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 KMOO15229 486 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 IPO13O94829 963 aaKnown RBP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 CHRNA1P02708 482 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 TGFB3P10600 412 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 ITGB6P18564 788 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 EMX1Q04741 257 aaPredicted RBP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 FAM214AQ32MH5 1076 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 SIGIRRQ6IA17 410 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 CCBE1Q6UXH8 406 aaPredicted RBP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 ZPBP2Q6X784 338 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 LARP4Q71RC2 724 aaKnown RBP eCLIP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 RBM23Q86U06 439 aaKnown RBP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 ZDHHC13Q8IUH4 622 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 RHOXF1Q8NHV9 184 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 CNIH3Q8TBE1 160 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 HPDLQ96IR7 371 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 GAD1Q99259 594 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 MROH8Q9H579 483 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 PRDM8Q9NQV8 689 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 PAK1IP1Q9NWT1 392 aaPredicted RBP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 SNTG2Q9NY99 539 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 SLAMF8Q9P0V8 285 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 ITM2BQ9Y287 266 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 BTRCQ9Y297 605 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 ANGPTL3Q9Y5C1 460 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 CITO14578 2027 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 USP34Q70CQ2 3546 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 IGKV6D-21A0A0A0MT36 114 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 IQCF3P0C7M6 154 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 EIF2DP41214 584 aaKnown RBP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 IL5RAQ01344 420 aa14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 TARBP2Q15633 366 aaKnown RBP14.62□□□□□ -0.07
NCKIPSD-204ENST00000416649 ZCCHC8Q6NZY4 707 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms