RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ATXN10Q9UBB4 475 aa14.96□□□□□ -0.01
UBXN4-203ENST00000416538 TBC1D29Q9UFV1 150 aa14.96□□□□□ -0.01
UBXN4-203ENST00000416538 REXO2Q9Y3B8 237 aaKnown RBP14.96□□□□□ -0.01
UBXN4-203ENST00000416538 HELZ2Q9BYK8 2649 aaKnown RBP14.96□□□□□ -0.02
UBXN4-203ENST00000416538 ZNF462Q96JM2 2506 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 A0A0A6YYK5 440 aaPredicted RBP14.95□□□□□ -0.02
UBXN4-203ENST00000416538 SOWAHDA6NJG2 315 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 GPR39O43194 453 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 PMPCBO75439 489 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 NDST3O95803 873 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 JMJD7P0C870 316 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 ZFXP17010 805 aaPredicted RBP14.95□□□□□ -0.02
UBXN4-203ENST00000416538 ZNF8P17098 575 aaPredicted RBP14.95□□□□□ -0.02
UBXN4-203ENST00000416538 BPIP17213 487 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 FECHP22830 423 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 MPSTP25325 297 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 CA5AP35218 305 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 FASLGP48023 281 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 CDK18Q07002 472 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 VAC14Q08AM6 782 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 LRP8Q14114 963 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.95□□□□□ -0.02
UBXN4-203ENST00000416538 KIAA1614Q5VZ46 1190 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 CHST15Q7LFX5 561 aaPredicted RBP14.95□□□□□ -0.02
UBXN4-203ENST00000416538 TMC3Q7Z5M5 1100 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 KATNAL2Q8IYT4 538 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 TTC9Q92623 222 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 GORASP1Q9BQQ3 440 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 MAK16Q9BXY0 300 aaKnown RBP14.95□□□□□ -0.02
UBXN4-203ENST00000416538 ADGRE3Q9BY15 652 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 SEMA4CQ9C0C4 833 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 C10orf88Q9H8K7 445 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 ZNHIT2Q9UHR6 403 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 PCDHA13Q9Y5I0 950 aa14.95□□□□□ -0.02
UBXN4-203ENST00000416538 PRR19A6NJB7 356 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 TMX2-CTNND1H3BSU7 103 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 K7ENP7 123 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 NUAK1O60285 661 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 MTX2O75431 263 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 THRAP10827 490 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 WT1P19544 449 aaPredicted RBP14.94□□□□□ -0.02
UBXN4-203ENST00000416538 GPR3P46089 330 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 MAPK10P53779 464 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 UCNP55089 124 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 TFDP3Q5H9I0 405 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 ZNF569Q5MCW4 686 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 BROXQ5VW32 411 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 C11orf63Q6NUN7 778 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 INO80CQ6PI98 192 aaPredicted RBP14.94□□□□□ -0.02
UBXN4-203ENST00000416538 ADGRG6Q86SQ4 1221 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 ZC3H18Q86VM9 953 aaKnown RBP14.94□□□□□ -0.02
UBXN4-203ENST00000416538 ZFAND4Q86XD8 727 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 ZNF567Q8N184 647 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 TTC30BQ8N4P2 665 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 CCHCR1Q8TD31 782 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 TFB1MQ8WVM0 346 aaKnown RBP14.94□□□□□ -0.02
UBXN4-203ENST00000416538 USP7Q93009 1102 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 QKIQ96PU8 341 aaKnown RBP eCLIP14.94□□□□□ -0.021e-7■■■■■ 43.9
UBXN4-203ENST00000416538 SPATA16Q9BXB7 569 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 RBSNQ9H1K0 784 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 OR2AG1Q9H205 316 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 MAGEE1Q9HCI5 957 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 PLSCR2Q9NRY7 297 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 PIEZO2Q9H5I5 2752 aa14.94□□□□□ -0.02
UBXN4-203ENST00000416538 PIKFYVEQ9Y2I7 2098 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 RGSL1A5PLK6 1076 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 NVLO15381 856 aaKnown RBP14.93□□□□□ -0.02
UBXN4-203ENST00000416538 ZNF75DP51815 510 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 LIMK2P53671 638 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 WNT3AP56704 352 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 TFDP2Q14188 446 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 PLA2G4EQ3MJ16 856 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 CRTC3Q6UUV7 619 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 RAD9BQ6WBX8 426 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 VASH2Q86V25 355 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 PIM3Q86V86 326 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 ZNF547Q8IVP9 402 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 TRAM1L1Q8N609 369 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 GLYATL1Q969I3 302 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 MRGPRX2Q96LB1 330 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 CMKLR1Q99788 373 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 CARD9Q9H257 536 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 BPIFA1Q9NP55 256 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 KCNK4Q9NYG8 393 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 SCHIP1Q9P0W5 487 aaPredicted RBP14.93□□□□□ -0.02
UBXN4-203ENST00000416538 SLC23A2Q9UGH3 650 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 DUSP10Q9Y6W6 482 aa14.93□□□□□ -0.02
UBXN4-203ENST00000416538 LOC285095A0A1B0GVY8 99 aa14.92□□□□□ -0.02
UBXN4-203ENST00000416538 CHUKO15111 745 aa14.92□□□□□ -0.02
UBXN4-203ENST00000416538 GRID2O43424 1007 aa14.92□□□□□ -0.02
UBXN4-203ENST00000416538 LIPCP11150 499 aa14.92□□□□□ -0.02
UBXN4-203ENST00000416538 FGF3P11487 239 aaPredicted RBP14.92□□□□□ -0.02
UBXN4-203ENST00000416538 NR2C2P49116 596 aa14.92□□□□□ -0.02
UBXN4-203ENST00000416538 HHEXQ03014 270 aa14.92□□□□□ -0.02
UBXN4-203ENST00000416538 SIRPB2Q5JXA9 342 aa14.92□□□□□ -0.02
UBXN4-203ENST00000416538 AADACL2Q6P093 401 aa14.92□□□□□ -0.02
UBXN4-203ENST00000416538 BBS12Q6ZW61 710 aa14.92□□□□□ -0.02
UBXN4-203ENST00000416538 DTX1Q86Y01 620 aa14.92□□□□□ -0.02
UBXN4-203ENST00000416538 ZNF843Q8N446 348 aa14.92□□□□□ -0.02
UBXN4-203ENST00000416538 OR4D9Q8NGE8 314 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms