RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 TRBV5-7A0A0A0MS05 114 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 DYTNA2CJ06 578 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 TARSL2A2RTX5 802 aaKnown RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 TMCO5BA8MYB1 307 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 FAM157AC9JC47 383 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 STMND1H3BQB6 276 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 H3BQF6 201 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 LDLRAD4O15165 306 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 RNMTO43148 476 aaKnown RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 SHOX2O60902 331 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 TACC1O75410 805 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 SMC2O95347 1197 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 CAVIN2O95810 425 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 MLYCDO95822 493 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 HEXAP06865 529 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 GALTP07902 379 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 CFC1BP0CG36 223 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 CFC1P0CG37 223 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 KRT5P13647 590 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ZNF8P17098 575 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ALOX12P18054 663 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 CDH2P19022 906 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 GPTP24298 496 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 KLRC2P26717 231 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 YWHAQP27348 245 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 OAS2P29728 719 aaKnown RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 MAPK4P31152 587 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 HNRNPH1P31943 449 aaKnown RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ICAM3P32942 547 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 HOXD13P35453 343 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 GABRB2P47870 512 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 FNTAP49354 379 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 CTCFP49711 727 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ARSFP54793 590 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 YWHAZP63104 245 aaKnown RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ILF3Q12906 894 aaKnown RBP eCLIP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 HNF4GQ14541 408 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 SMC1AQ14683 1233 aaKnown RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 CRYMQ14894 314 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 PTPN14Q15678 1187 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 CCNG2Q16589 344 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 GSTA3Q16772 222 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 DUSP6Q16828 381 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 TPD52L1Q16890 204 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 EDRF1Q3B7T1 1238 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ALDH1L2Q3SY69 923 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 CCDC158Q5M9N0 1113 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 C1QTNF12Q5T7M4 302 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 SERTAD4-AS1Q5TG53 156 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 CDC73Q6P1J9 531 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 AAGABQ6PD74 315 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 TRIM65Q6PJ69 517 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 RHBDF2Q6PJF5 856 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 C16orf54Q6UWD8 224 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 TMCO3Q6UWJ1 677 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 LRRC31Q6UY01 552 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 CCDC129Q6ZRS4 1044 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 TRMT1LQ7Z2T5 733 aaKnown RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 SLC46A3Q7Z3Q1 461 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 FAM160B2Q86V87 743 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 TMC8Q8IU68 726 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ZDHHC23Q8IYP9 409 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 FAM185AQ8N0U4 392 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 CCDC26Q8TAB7 109 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 MAGEC3Q8TD91 643 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ARHGAP45Q92619 1136 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 NSUN4Q96CB9 384 aaKnown RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 IL17FQ96PD4 163 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 PGLYRP2Q96PD5 576 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 PIP5K1AQ99755 562 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 SLX1AQ9BQ83 275 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 SDF4Q9BRK5 362 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 H2AFJQ9BTM1 129 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 TRMT61BQ9BVS5 477 aaKnown RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 B3GNT4Q9C0J1 378 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 CCDC68Q9H2F9 335 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ACTR5Q9H9F9 607 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ZNF304Q9HCX3 659 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 EIF2B3Q9NR50 452 aaKnown RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 SNTG1Q9NSN8 517 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 C20orf141Q9NUB4 165 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 HCFC1R1Q9NWW0 138 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 MALT1Q9UDY8 824 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 LIMA1Q9UHB6 759 aaKnown RBP2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 NRBP1Q9UHY1 535 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 SLCO3A1Q9UIG8 710 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 CDH22Q9UJ99 828 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 PCDHGB5Q9Y5G0 923 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 SLC4A4Q9Y6R1 1079 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 EFCAB6Q5THR3 1501 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ERCC6Q03468 1493 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 RGS12O14924 1447 aa2.5□□□□□ -2.01
HMGB3P2-201ENST00000411913 ABCC11Q96J66 1382 aa2.49□□□□□ -2.01
HMGB3P2-201ENST00000411913 NOTCH2Q04721 2471 aa2.49□□□□□ -2.01
HMGB3P2-201ENST00000411913 SOS1Q07889 1333 aaPredicted RBP2.49□□□□□ -2.01
HMGB3P2-201ENST00000411913 TTC41PQ6P2S7 1318 aa2.49□□□□□ -2.01
HMGB3P2-201ENST00000411913 ADGRF5Q8IZF2 1346 aa2.49□□□□□ -2.01
HMGB3P2-201ENST00000411913 ABCC3O15438 1527 aa2.49□□□□□ -2.01
HMGB3P2-201ENST00000411913 URB2Q14146 1524 aaKnown RBP2.49□□□□□ -2.01
HMGB3P2-201ENST00000411913 IGKV3D-15A0A087WSY6 115 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms