RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 ASXL3Q9C0F0 2248 aa17.76■□□□□ 0.43
PDLIM2-206ENST00000409141 GRID2O43424 1007 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 NUAK1O60285 661 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 ZNF8P17098 575 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 PDE1BQ01064 536 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 MSLNQ13421 630 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 CHRNA6Q15825 494 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 C14orf28Q4W4Y0 310 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 ADGRG6Q86SQ4 1221 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 OR4K2Q8NGD2 314 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 DTX3LQ8TDB6 740 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 CCDC74AQ96AQ1 378 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 VPS35Q96QK1 796 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 CCDC3Q9BQI4 270 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 PCYT1BQ9Y5K3 369 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 PLXNB3Q9ULL4 1909 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 KIF5CO60282 957 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 UGT1A9O60656 530 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 MTX2O75431 263 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 AP2A1O95782 977 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 PROS1P07225 676 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 ETS1P14921 441 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 TPH1P17752 444 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 UGT1A6P19224 532 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 UGT1A1P22309 533 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 UGT1A4P22310 534 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 MSNP26038 577 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 UGT1A3P35503 534 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 UGT1A5P35504 534 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 FDFT1P37268 417 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 LMAN1P49257 510 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 CAMK2BQ13554 666 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 CDCP2Q5VXM1 449 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 DRICH1Q6PGQ1 229 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 GSTA5Q7RTV2 222 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 PRUNE1Q86TP1 453 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 CACTIN-AS1Q8N1I8 211 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 SLC35F6Q8N357 371 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 DCBLD1Q8N8Z6 715 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 PBKQ96KB5 322 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 UGT1A7Q9HAW7 530 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 UGT1A10Q9HAW8 530 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 UGT1A8Q9HAW9 530 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 ETNK1Q9HBU6 452 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 HOMER3Q9NSC5 361 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 TMPRSS11EQ9UL52 423 aa17.75■□□□□ 0.43
PDLIM2-206ENST00000409141 TRABD2BA6NFA1 517 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 ERI2A8K979 691 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 E7EVH7 732 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 VEGFDO43915 354 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 CDK14O94921 469 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 ECEL1O95672 775 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 ACP5P13686 325 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 GLB1P16278 677 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 ITGA9Q13797 1035 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 HLTFQ14527 1009 aaKnown RBP eCLIP17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 GSE1Q14687 1217 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 CERCAMQ5T4B2 595 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 LINC00523Q86TU6 105 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 ZNF398Q8TD17 642 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 TTC25Q96NG3 672 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 SYNDIG1Q9H7V2 258 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 RAB6BQ9NRW1 208 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 PAK5Q9P286 719 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 LRIT1Q9P2V4 623 aa17.74■□□□□ 0.43
PDLIM2-206ENST00000409141 SPEGQ15772 3267 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 IGF2RP11717 2491 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 GPR89AB7ZAQ6 455 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 GAPDHSO14556 408 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 ZSCAN5DPP0CG00 497 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 GPR89BP0CG08 455 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 MAZP56270 477 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 TMEM115Q12893 351 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 BIRC2Q13490 618 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 KHDC1Q4VXA5 237 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 CRTC3Q6UUV7 619 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 Q8N9G6 341 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 GLIS1Q8NBF1 620 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 OR13C4Q8NGS5 318 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 WDR48Q8TAF3 677 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 DEPDC7Q96QD5 511 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 PIH1D1Q9NWS0 290 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 FKBPLQ9UIM3 349 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 RABGEF1Q9UJ41 708 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 APPL1Q9UKG1 709 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 KCNK6Q9Y257 313 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 RNF215Q9Y6U7 377 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 RP1P56715 2156 aa17.73■□□□□ 0.43
PDLIM2-206ENST00000409141 ARHGEF17Q96PE2 2063 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 MAP1BP46821 2468 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 TMEM8BA6NDV4 472 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 CHUKO15111 745 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 NUDT21O43809 227 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 PRAMEF1O95521 474 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 RPL22P35268 128 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 KCNJ1P48048 391 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 TMPRSS15P98073 1019 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 GTF2H3Q13889 308 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 POU6F1Q14863 301 aa17.72■□□□□ 0.43
PDLIM2-206ENST00000409141 LDLRAP1Q5SW96 308 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms