RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 LRRC34Q8IZ02 419 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 CHPFQ8IZ52 775 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 ZNF513Q8N8E2 541 aaPredicted RBP20.86■□□□□ 0.93
TPM1-208ENST00000404484 RDH11Q8TC12 318 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 SREK1Q8WXA9 508 aaKnown RBP20.86■□□□□ 0.93
TPM1-208ENST00000404484 ULK4Q96C45 1275 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 FAM129BQ96TA1 746 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 OLFM1Q99784 485 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 FAM107BQ9H098 131 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 NMRAL1Q9HBL8 299 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 GPAMQ9HCL2 828 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 CACNA2D2Q9NY47 1150 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 NFKBIL1Q9UBC1 381 aaPredicted RBP20.86■□□□□ 0.93
TPM1-208ENST00000404484 CRLS1Q9UJA2 301 aa20.86■□□□□ 0.93
TPM1-208ENST00000404484 TRBV5-4A0A0C4DH59 114 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 WDR91A4D1P6 747 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 PSMD11O00231 422 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 GAPDHSO14556 408 aaPredicted RBP20.85■□□□□ 0.93
TPM1-208ENST00000404484 KLHL2O95198 593 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 TOP3BO95985 862 aaKnown RBP20.85■□□□□ 0.93
TPM1-208ENST00000404484 ESR1P03372 595 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 BPGMP07738 259 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 PRSS56P0CW18 603 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 ZNF7P17097 686 aaPredicted RBP20.85■□□□□ 0.93
TPM1-208ENST00000404484 DRD1P21728 446 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 DRD4P21917 467 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 CD9P21926 228 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 MMP12P39900 470 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 DCDC1P59894 354 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 IRF9Q00978 393 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 FAM83EQ2M2I3 478 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 AGAP9Q5VTM2 703 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 KLC3Q6P597 504 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 ZNF549Q6P9A3 640 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 FBXL19Q6PCT2 694 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 MAMSTRQ6ZN01 415 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 NUDCD3Q8IVD9 361 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 RBFAQ8N0V3 343 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 SYNPOQ8N3V7 929 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 ZNF398Q8TD17 642 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 DTX3LQ8TDB6 740 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 ZNF75CPQ92670 426 aaPredicted RBP20.85■□□□□ 0.93
TPM1-208ENST00000404484 FAM96AQ9H5X1 160 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 MANSC1Q9H8J5 431 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 PRSS16Q9NQE7 514 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 TAS2R13Q9NYV9 303 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 TMEM216Q9P0N5 145 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 EMCNQ9ULC0 261 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 LAMTOR5O43504 91 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 RNASEH1O60930 286 aaKnown RBP20.85■□□□□ 0.93
TPM1-208ENST00000404484 RHOBTB1O94844 696 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 IL1BP01584 269 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 PYGLP06737 847 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 PKMP14618 531 aaKnown RBP20.85■□□□□ 0.93
TPM1-208ENST00000404484 CHRNA6Q15825 494 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 LRRC73Q5JTD7 316 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 ATG16L1Q676U5 607 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 SDE2Q6IQ49 451 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 C16orf46Q6P387 395 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 PLD6Q8N2A8 252 aaKnown RBP20.85■□□□□ 0.93
TPM1-208ENST00000404484 GPR26Q8NDV2 337 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 ZNF473Q8WTR7 871 aaKnown RBP20.85■□□□□ 0.93
TPM1-208ENST00000404484 ATOH1Q92858 354 aaPredicted RBP20.85■□□□□ 0.93
TPM1-208ENST00000404484 GRAMD1AQ96CP6 724 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 SIRPGQ9P1W8 387 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 SARDHQ9UL12 918 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 HCN2Q9UL51 889 aa20.85■□□□□ 0.93
TPM1-208ENST00000404484 RUVBL2Q9Y230 463 aaKnown RBP20.85■□□□□ 0.93
TPM1-208ENST00000404484 H3BMM5 538 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 PRMT5O14744 637 aaPredicted RBP20.84■□□□□ 0.93
TPM1-208ENST00000404484 KLF11O14901 512 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 SYNCRIPO60506 623 aaKnown RBP20.84■□□□□ 0.93
TPM1-208ENST00000404484 RPS3P23396 243 aaKnown RBP eCLIP20.84■□□□□ 0.93
TPM1-208ENST00000404484 FMO4P31512 558 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 CDKN1CP49918 316 aaPredicted RBP20.84■□□□□ 0.93
TPM1-208ENST00000404484 CDKN2DP55273 166 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 SEMG2Q02383 582 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 PDAP1Q13442 181 aaKnown RBP20.84■□□□□ 0.93
TPM1-208ENST00000404484 ITIH4Q14624 930 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 TRMT11Q7Z4G4 463 aaKnown RBP20.84■□□□□ 0.93
TPM1-208ENST00000404484 SERPINA9Q86WD7 417 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 CENPLQ8N0S6 344 aaPredicted RBP20.84■□□□□ 0.93
TPM1-208ENST00000404484 SPEM1Q8N4L4 309 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 KCTD4Q8WVF5 259 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 RAB7BQ96AH8 199 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 CLPBQ9H078 707 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 IRF2BPLQ9H1B7 796 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 FBRSQ9HAH7 460 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 SYTL2Q9HCH5 934 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 FAM86C1Q9NVL1 165 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 C2orf42Q9NWW7 574 aa20.84■□□□□ 0.93
TPM1-208ENST00000404484 ANTXRLA6NF34 631 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 AGAP14A8MT82 685 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 K7EQS6 105 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 VPS26AO75436 327 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 LTA4HP09960 611 aaKnown RBP20.83■□□□□ 0.92
TPM1-208ENST00000404484 ELFN1P0C7U0 828 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 ACRV1P26436 265 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 RALGDSQ12967 914 aa20.83■□□□□ 0.92
TPM1-208ENST00000404484 CAMK2GQ13555 558 aaPredicted RBP20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms