RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 AFTPHQ6ULP2 937 aa10.67□□□□□ -0.7
CLIP4-204ENST00000404424 PATL1Q86TB9 770 aaKnown RBP10.67□□□□□ -0.7
CLIP4-204ENST00000404424 ZNF598Q86UK7 904 aaKnown RBP10.67□□□□□ -0.7
CLIP4-204ENST00000404424 PROSER1Q86XN7 944 aa10.67□□□□□ -0.7
CLIP4-204ENST00000404424 EGFL6Q8IUX8 553 aa10.67□□□□□ -0.7
CLIP4-204ENST00000404424 C2orf69Q8N8R5 385 aa10.67□□□□□ -0.7
CLIP4-204ENST00000404424 TERB1Q8NA31 727 aa10.67□□□□□ -0.7
CLIP4-204ENST00000404424 LEMD2Q8NC56 503 aa10.67□□□□□ -0.7
CLIP4-204ENST00000404424 SEMA4BQ9NPR2 832 aaPredicted RBP10.67□□□□□ -0.7
CLIP4-204ENST00000404424 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLIP4-204ENST00000404424 ZIM2Q9NZV7 527 aa10.67□□□□□ -0.7
CLIP4-204ENST00000404424 ANAPC2Q9UJX6 822 aa10.67□□□□□ -0.7
CLIP4-204ENST00000404424 PCDHB5Q9Y5E4 795 aa10.67□□□□□ -0.7
CLIP4-204ENST00000404424 TTC3P53804 2025 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 A0A0J9YVX5 310 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 FAM149AA5PLN7 773 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 CCDC154A6NI56 674 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 F8W810 466 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 TMEM189-UBE2V1I3L0A0 370 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 GIPC1O14908 333 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 MUSKO15146 869 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 CLOCKO15516 846 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 SNX2O60749 519 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 ECI2O75521 394 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 SLC22A3O75751 556 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 IGLV3-27P01718 113 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 GNAO1P09471 354 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 UGT1A6P19224 532 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 CHRM3P20309 590 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 CD9P21926 228 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 HTR1EP28566 365 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 OXTRP30559 389 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 CAPGP40121 348 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 LIPEQ05469 1076 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 RING1Q06587 406 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 PRR23BQ6ZRT6 265 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 TMEM199Q8N511 208 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 DHRSXQ8N5I4 330 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 ZNF420Q8TAQ5 688 aaPredicted RBP10.66□□□□□ -0.7
CLIP4-204ENST00000404424 DNAJB14Q8TBM8 379 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 RNF217Q8TC41 542 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 ISOC1Q96CN7 298 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 TRIB3Q96RU7 358 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 RETREG1Q9H6L5 497 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 PDFQ9HBH1 243 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 SPC25Q9HBM1 224 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 TLR8Q9NR97 1041 aaKnown RBP10.66□□□□□ -0.7
CLIP4-204ENST00000404424 RIC8BQ9NVN3 520 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 SMPD3Q9NY59 655 aaPredicted RBP10.66□□□□□ -0.7
CLIP4-204ENST00000404424 MARCH2Q9P0N8 246 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 ANKRD36A6QL64 1941 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 PFDN6O15212 129 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 TPST1O60507 370 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 NDUFS3O75489 264 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 PSMA3P25788 255 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 FMO4P31512 558 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 ACVRL1P37023 503 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 ZFP36L2P47974 494 aaKnown RBP10.66□□□□□ -0.7
CLIP4-204ENST00000404424 GPR15P49685 360 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 ZNF140P52738 457 aaPredicted RBP10.66□□□□□ -0.7
CLIP4-204ENST00000404424 ERVK-8P63133 956 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 TSNQ15631 228 aaKnown RBP10.66□□□□□ -0.7
CLIP4-204ENST00000404424 FXNQ16595 210 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 SETMARQ53H47 684 aaPredicted RBP10.66□□□□□ -0.7
CLIP4-204ENST00000404424 GPR180Q86V85 440 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 CLVS1Q8IUQ0 354 aaPredicted RBP10.66□□□□□ -0.7
CLIP4-204ENST00000404424 OR56A4Q8NGH8 313 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 OSCP1Q8WVF1 389 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 FBXO32Q969P5 355 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 FUBP1Q96AE4 644 aaKnown RBP10.66□□□□□ -0.7
CLIP4-204ENST00000404424 PPP1R14BQ96C90 147 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 PLEKHG4BQ96PX9 1271 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 MGME1Q9BQP7 344 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 HIPK3Q9H422 1215 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 SUN2Q9UH99 717 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 ZNF639Q9UID6 485 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 FAM50BQ9Y247 325 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 MED16Q9Y2X0 877 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 ARIH1Q9Y4X5 557 aaPredicted RBP10.66□□□□□ -0.7
CLIP4-204ENST00000404424 FADS3Q9Y5Q0 445 aa10.66□□□□□ -0.7
CLIP4-204ENST00000404424 FAM234BA2RU67 622 aa10.65□□□□□ -0.7
CLIP4-204ENST00000404424 C9JVG2 144 aa10.65□□□□□ -0.7
CLIP4-204ENST00000404424 PFDN1O60925 122 aa10.65□□□□□ -0.7
CLIP4-204ENST00000404424 LDLRP01130 860 aa10.65□□□□□ -0.7
CLIP4-204ENST00000404424 ENO2P09104 434 aaPredicted RBP10.65□□□□□ -0.7
CLIP4-204ENST00000404424 GRK4P32298 578 aa10.65□□□□□ -0.7
CLIP4-204ENST00000404424 KPNA1P52294 538 aaPredicted RBP10.65□□□□□ -0.7
CLIP4-204ENST00000404424 POLR2JP52435 117 aaKnown RBP10.65□□□□□ -0.7
CLIP4-204ENST00000404424 EMX2Q04743 252 aa10.65□□□□□ -0.7
CLIP4-204ENST00000404424 TAF1AQ15573 450 aaPredicted RBP10.65□□□□□ -0.7
CLIP4-204ENST00000404424 PAGE3Q5JUK9 113 aa10.65□□□□□ -0.7
CLIP4-204ENST00000404424 MIB1Q86YT6 1006 aa10.65□□□□□ -0.7
CLIP4-204ENST00000404424 PNPT1Q8TCS8 783 aaKnown RBP10.65□□□□□ -0.7
CLIP4-204ENST00000404424 CYGBQ8WWM9 190 aa10.65□□□□□ -0.7
CLIP4-204ENST00000404424 VPS33AQ96AX1 596 aa10.65□□□□□ -0.7
CLIP4-204ENST00000404424 BDH2Q9BUT1 245 aa10.65□□□□□ -0.7
CLIP4-204ENST00000404424 NPLQ9BXD5 320 aaPredicted RBP10.65□□□□□ -0.7
CLIP4-204ENST00000404424 OSBPL6Q9BZF3 934 aa10.65□□□□□ -0.7
CLIP4-204ENST00000404424 ZFYVE28Q9HCC9 887 aa10.65□□□□□ -0.7
CLIP4-204ENST00000404424 PCTPQ9UKL6 214 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms