RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 LSMEM2Q8N112 164 aa16.64■□□□□ 0.25
CSNK1D-205ENST00000403276 TXLNBQ8N3L3 684 aa16.64■□□□□ 0.25
CSNK1D-205ENST00000403276 GRAMD1AQ96CP6 724 aa16.64■□□□□ 0.25
CSNK1D-205ENST00000403276 GORASP1Q9BQQ3 440 aa16.64■□□□□ 0.25
CSNK1D-205ENST00000403276 OR2AG1Q9H205 316 aa16.64■□□□□ 0.25
CSNK1D-205ENST00000403276 ASCL3Q9NQ33 180 aa16.64■□□□□ 0.25
CSNK1D-205ENST00000403276 VPS18Q9P253 973 aa16.64■□□□□ 0.25
CSNK1D-205ENST00000403276 ATXN10Q9UBB4 475 aa16.64■□□□□ 0.25
CSNK1D-205ENST00000403276 TRHDEQ9UKU6 1024 aa16.64■□□□□ 0.25
CSNK1D-205ENST00000403276 KCNK6Q9Y257 313 aa16.64■□□□□ 0.25
CSNK1D-205ENST00000403276 CCDC187A0A096LP49 1063 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 DDX3YO15523 660 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 KCNN4O15554 427 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 BUD23O43709 281 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 NUAK1O60285 661 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 DXOO77932 396 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 RBP3P10745 1247 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 ACP5P13686 325 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 CETN2P41208 172 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 INHBCP55103 352 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 DCDC1P59894 354 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 MPP3Q13368 585 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 OLIG2Q13516 323 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 SLC1A5Q15758 541 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 ZNF569Q5MCW4 686 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 LRRC69Q6ZNQ3 347 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 USP53Q70EK8 1073 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 TTC30BQ8N4P2 665 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 TRAM1L1Q8N609 369 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 WDR36Q8NI36 951 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 ZNF578Q96N58 590 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 SLC46A1Q96NT5 459 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 ZSCAN5AQ9BUG6 496 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 GBA3Q9H227 469 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 RDH14Q9HBH5 336 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 TMPRSS11EQ9UL52 423 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 PYCARDQ9ULZ3 195 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 PPP2R2CQ9Y2T4 447 aa16.63■□□□□ 0.25
CSNK1D-205ENST00000403276 ITPR1Q14643 2758 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 RRP8O43159 456 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 GRID2O43424 1007 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 MTX2O75431 263 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 TJP3O95049 919 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 TNFSF15O95150 251 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 EPOP01588 193 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 HGFP14210 728 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 RBMS1P29558 406 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 TNNT3P45378 269 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 ABCG1P45844 678 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 BIRC2Q13490 618 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 ANKRD20A2Q5SQ80 823 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 ANKRD20A1Q5TYW2 823 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 ANKRD20A3Q5VUR7 823 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 ZNF662Q6ZS27 426 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 ZNF438Q7Z4V0 828 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 ADGRG6Q86SQ4 1221 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 PDZD3Q86UT5 571 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 ZNF761Q86XN6 746 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 CDKL3Q8IVW4 592 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 UBL4BQ8N7F7 174 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 CCDC110Q8TBZ0 833 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 BLOC1S5Q8TDH9 187 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 GLYATL1Q969I3 302 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 LIN37Q96GY3 246 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 SRPK1Q96SB4 655 aaKnown RBP16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 APOL2Q9BQE5 337 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 FICDQ9BVA6 458 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 CARD9Q9H257 536 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 TRIM39Q9HCM9 518 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 RAD18Q9NS91 495 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 NFKBIL1Q9UBC1 381 aaPredicted RBP16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 TBC1D29Q9UFV1 150 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 CAPN6Q9Y6Q1 641 aa16.62■□□□□ 0.25
CSNK1D-205ENST00000403276 PTPRQQ9UMZ3 2332 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 SNX2O60749 519 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 PSMB4P28070 264 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 HMGCLP35914 325 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 GEMP55040 296 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 ZFP36L1Q07352 338 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 PEX6Q13608 980 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 LRP8Q14114 963 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 PTPRCAPQ14761 206 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 ATP13A5Q4VNC0 1218 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 KHDC1Q4VXA5 237 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 NKAIN2Q5VXU1 208 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 CRTC3Q6UUV7 619 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 RAB11FIP2Q7L804 512 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 GLT6D1Q7Z4J2 308 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 SYCE1Q8N0S2 351 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 FBXO39Q8N4B4 442 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 SLC37A2Q8TED4 501 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 TMEM74Q96NL1 305 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 FSD1LQ9BXM9 530 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 SEMA6CQ9H3T2 930 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 RMI1Q9H9A7 625 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 THSD1Q9NS62 852 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 PCDHGA8Q9Y5G5 932 aa16.61■□□□□ 0.25
CSNK1D-205ENST00000403276 MIF4GDA9UHW6 222 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-205ENST00000403276 UGT1A9O60656 530 aa16.6■□□□□ 0.25
CSNK1D-205ENST00000403276 UGT1A6P19224 532 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms