RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 CRNNQ9UBG3 495 aaPredicted RBP13.11□□□□□ -0.31
ITSN1-208ENST00000399349 EFR3BQ9Y2G0 817 aa13.11□□□□□ -0.31
ITSN1-208ENST00000399349 CHRNGP07510 517 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 NR2F6P10588 404 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 HTR1BP28222 390 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 MTHFRP42898 656 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 POLR2JP52435 117 aaKnown RBP13.1□□□□□ -0.31
ITSN1-208ENST00000399349 CARTPTQ16568 116 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 RNASE12Q5GAN4 147 aaKnown RBP13.1□□□□□ -0.31
ITSN1-208ENST00000399349 SNAP47Q5SQN1 464 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 GIPC3Q8TF64 312 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 TTYH3Q9C0H2 523 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 TMCO1Q9UM00 188 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 OR6C75A6NL08 312 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 GTPBP1O00178 669 aaKnown RBP13.1□□□□□ -0.31
ITSN1-208ENST00000399349 SSNA1O43805 119 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 STK16O75716 305 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 PLEKHG4Q58EX7 1191 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 DENND5AQ6IQ26 1287 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 RGMBQ6NW40 437 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 MZT2BQ6NZ67 158 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 TAC4Q86UU9 113 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 ADGRG2Q8IZP9 1017 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 C1GALT1C1Q96EU7 318 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 DNAJC1Q96KC8 554 aaKnown RBP13.1□□□□□ -0.31
ITSN1-208ENST00000399349 SDCBP2Q9H190 292 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 MAGEL2Q9UJ55 1249 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 PREX1Q8TCU6 1659 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 ABHD14A-ACY1A0A1B0GW23 586 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 HAT1O14929 419 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 CHRNB2P17787 502 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 GALK1P51570 392 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 RAPSNQ13702 412 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 BTN2A1Q7KYR7 527 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 CROCCP3Q8IVE0 287 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 TEX47Q8TBZ9 253 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 EEF1AKMT1Q8WVE0 214 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 EBF2Q9HAK2 575 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 MCUBQ9NWR8 336 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 H3BM21 787 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 QSOX1O00391 747 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 GMFGO60234 142 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 NDST3O95803 873 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 SERPINA1P01009 418 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 RPL17P18621 184 aaKnown RBP13.1□□□□□ -0.31
ITSN1-208ENST00000399349 ITPKBP27987 946 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 IL12AP29459 219 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 INHBEP58166 350 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 LILRA4P59901 499 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 KHDC1Q4VXA5 237 aaKnown RBP13.1□□□□□ -0.31
ITSN1-208ENST00000399349 LIN52Q52LA3 116 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 SLC25A24Q6NUK1 477 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 MZT2AQ6P582 158 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 AGMOQ6ZNB7 445 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 KRT74Q7RTS7 529 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 C17orf64Q86WR6 236 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 TP53INP1Q96A56 240 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 RPL10LQ96L21 214 aaKnown RBP13.1□□□□□ -0.31
ITSN1-208ENST00000399349 HOPXQ9BPY8 73 aaPredicted RBP13.1□□□□□ -0.31
ITSN1-208ENST00000399349 LMAN2LQ9H0V9 348 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 ABCB9Q9NP78 766 aa13.1□□□□□ -0.31
ITSN1-208ENST00000399349 PDP1Q9P0J1 537 aaPredicted RBP13.1□□□□□ -0.31
ITSN1-208ENST00000399349 KIAA1522Q9P206 1035 aaPredicted RBP13.1□□□□□ -0.31
ITSN1-208ENST00000399349 NOCTQ9UK39 431 aaKnown RBP13.1□□□□□ -0.31
ITSN1-208ENST00000399349 PLIN3O60664 434 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 LCA5LO95447 670 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 TOP3BO95985 862 aaKnown RBP13.09□□□□□ -0.31
ITSN1-208ENST00000399349 NCK1P16333 377 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 ARL2P36404 184 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 RPL3P39023 403 aaKnown RBP13.09□□□□□ -0.31
ITSN1-208ENST00000399349 LIMK2P53671 638 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 SF1Q15637 639 aaKnown RBP13.09□□□□□ -0.31
ITSN1-208ENST00000399349 ZBTB6Q15916 424 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 CA9Q16790 459 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 ARMCX6Q7L4S7 300 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 FAM220AQ7Z4H9 259 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 TBC1D21Q8IYX1 336 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 ZNF607Q96SK3 696 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 SLC17A6Q9P2U8 582 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 ZNF222Q9UK12 451 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 AJAP1Q9UKB5 411 aaPredicted RBP13.09□□□□□ -0.31
ITSN1-208ENST00000399349 MAPRE3Q9UPY8 281 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 ARHGAP23Q9P227 1491 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 CCDC189A1A4V9 331 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 CCDC182A6NF36 153 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 PRAMEF1O95521 474 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 TACR2P21452 398 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 JAK1P23458 1154 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 SLC26A3P40879 764 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 SEPHS1P49903 392 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 TAS2R41P59536 307 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 KLF1Q13351 362 aaPredicted RBP13.09□□□□□ -0.31
ITSN1-208ENST00000399349 LSM12Q3MHD2 195 aaKnown RBP13.09□□□□□ -0.31
ITSN1-208ENST00000399349 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 LYPLAL1Q5VWZ2 237 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 ALKBH2Q6NS38 261 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 FAM171BQ6P995 826 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 PAOXQ6QHF9 649 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 GPR65Q8IYL9 337 aa13.09□□□□□ -0.31
ITSN1-208ENST00000399349 CBR4Q8N4T8 237 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms