RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 GPR45Q9Y5Y3 372 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 ANKRD12Q6UB98 2062 aa13.91□□□□□ -0.18
APOB-202ENST00000399256 H3BRB1 525 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 MATN3O15232 486 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 MAN1A2O60476 641 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 CRCPO75575 148 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 C1RP00736 705 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 HTR1AP08908 422 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 GSTM2P28161 218 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 ALDH3A2P51648 485 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 ARSDP51689 593 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 IST1P53990 364 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 DNASE1L3Q13609 305 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 DAG1Q14118 895 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 OR4D1Q15615 310 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 AASDHQ4L235 1098 aaPredicted RBP13.9□□□□□ -0.18
APOB-202ENST00000399256 HABP4Q5JVS0 413 aaKnown RBP13.9□□□□□ -0.18
APOB-202ENST00000399256 OR13J1Q8NGT2 312 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 C16orf70Q9BSU1 422 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 TSPYL2Q9H2G4 693 aaPredicted RBP13.9□□□□□ -0.18
APOB-202ENST00000399256 MUC13Q9H3R2 512 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 TOR3AQ9H497 397 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 SEMA4BQ9NPR2 832 aaPredicted RBP13.9□□□□□ -0.18
APOB-202ENST00000399256 TMED5Q9Y3A6 229 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 RALGAPA2Q2PPJ7 1873 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 CCDC154A6NI56 674 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 OXSR1O95747 527 aaPredicted RBP13.9□□□□□ -0.18
APOB-202ENST00000399256 CD1DP15813 335 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 SNX17Q15036 470 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 GLYATQ6IB77 296 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 SLC16A12Q6ZSM3 486 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 LIMS2Q7Z4I7 341 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 RAB44Q7Z6P3 723 aaPredicted RBP13.9□□□□□ -0.18
APOB-202ENST00000399256 CCDC117Q8IWD4 279 aaPredicted RBP13.9□□□□□ -0.18
APOB-202ENST00000399256 C8orf59Q8N0T1 100 aaPredicted RBP13.9□□□□□ -0.18
APOB-202ENST00000399256 BPIFB1Q8TDL5 484 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 FKBP10Q96AY3 582 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 PGAP3Q96FM1 320 aaPredicted RBP13.9□□□□□ -0.18
APOB-202ENST00000399256 NSMCE2Q96MF7 247 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 SMURF2Q9HAU4 748 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 CNGB3Q9NQW8 809 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 GIT1Q9Y2X7 761 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 PCDHGA8Q9Y5G5 932 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 FNDC1Q4ZHG4 1894 aaPredicted RBP13.9□□□□□ -0.18
APOB-202ENST00000399256 MYBPHLA2RUH7 354 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 UPK1AO00322 258 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 JRKO75564 520 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 F9P00740 461 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 ALPLP05186 524 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 FGF4P08620 206 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 MAXP61244 160 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 IFITM3Q01628 133 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 SKIV2LQ15477 1246 aaKnown RBP13.9□□□□□ -0.18
APOB-202ENST00000399256 PGS1Q32NB8 556 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 LDLRAD1Q5T700 205 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 ANKRD34AQ69YU3 496 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 TAF2Q6P1X5 1199 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 PARP8Q8N3A8 854 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 ZFP90Q8TF47 636 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 MAGED4Q96JG8 741 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 HMG20AQ9NP66 347 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 HPS4Q9NQG7 708 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 BAG5Q9UL15 447 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 NEU3Q9UQ49 428 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 PIN4Q9Y237 131 aaKnown RBP13.9□□□□□ -0.18
APOB-202ENST00000399256 KCTD3Q9Y597 815 aa13.9□□□□□ -0.18
APOB-202ENST00000399256 DNAJC25-GNG10A0A024R161 153 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 A0A0G2JLL6 359 aaPredicted RBP13.89□□□□□ -0.19
APOB-202ENST00000399256 NOBOXO60393 691 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 S1PR4O95977 384 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 CYBBP04839 570 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 ZNF24P17028 368 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 AGXTP21549 392 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 NFKB2Q00653 900 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 ITKQ08881 620 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 PRRT2Q7Z6L0 340 aaPredicted RBP13.89□□□□□ -0.19
APOB-202ENST00000399256 SLCO6A1Q86UG4 719 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 SCAIQ8N9R8 606 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 LEMD2Q8NC56 503 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 PCED1BQ96HM7 432 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 MTRRQ9UBK8 725 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 ZNF236Q9UL36 1845 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 CNTN5O94779 1100 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 INMTO95050 263 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 WISP3O95389 354 aaPredicted RBP13.89□□□□□ -0.19
APOB-202ENST00000399256 ALDH4A1P30038 563 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 ZFP36L2P47974 494 aaKnown RBP13.89□□□□□ -0.19
APOB-202ENST00000399256 SERPINH1P50454 418 aaKnown RBP13.89□□□□□ -0.19
APOB-202ENST00000399256 TRIM32Q13049 653 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 RCAN2Q14206 197 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 DPY19L1Q2PZI1 675 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 COQ5Q5HYK3 327 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 RBM48Q5RL73 367 aaKnown RBP13.89□□□□□ -0.19
APOB-202ENST00000399256 SLC2A7Q6PXP3 512 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 BHLHA9Q7RTU4 235 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 RIMKLAQ8IXN7 391 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 HS3ST5Q8IZT8 346 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 TOP6BLQ8N6T0 577 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 CCDC90BQ9GZT6 254 aa13.89□□□□□ -0.19
APOB-202ENST00000399256 KLHL25Q9H0H3 589 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms