RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 GDF3Q9NR23 364 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 MARCH4Q9P2E8 410 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 FAM186AA6NE01 2351 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 FAM237BA0A1B0GVD1 139 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CACNB4O00305 520 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CDX4O14627 284 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PYGLP06737 847 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 RHOXF2BP0C7M4 288 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ELK3P41970 407 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 POLD2P49005 469 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CARSP49589 748 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ARL4CP56559 192 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 C21orf59P57076 290 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 B4GALNT1Q00973 533 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 LAMB3Q13751 1172 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SMAD1Q15797 465 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 HLA-BQ31612 363 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 DNAJC21Q5F1R6 531 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TEX35Q5T0J7 233 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GPRC6AQ5T6X5 926 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 KIAA0930Q6ICG6 404 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CASC4Q6P4E1 433 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SNX20Q7Z614 316 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ADGRG6Q86SQ4 1221 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 DCP2Q8IU60 420 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 UNC5BQ8IZJ1 945 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 RBFAQ8N0V3 343 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PDIK1LQ8N165 341 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 DDHD1Q8NEL9 900 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ZNF398Q8TD17 642 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 NAT14Q8WUY8 206 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ZNF669Q96BR6 464 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SCARF2Q96GP6 870 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 HIC2Q96JB3 615 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 WDR92Q96MX6 357 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ELF4Q99607 663 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 RHOXF2Q9BQY4 288 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 NUSAP1Q9BXS6 441 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ASB8Q9H765 288 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ERVMER34-1Q9H9K5 563 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 MRPL40Q9NQ50 206 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PHPT1Q9NRX4 125 aaPredicted RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 IL1RAPL1Q9NZN1 696 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 APPL1Q9UKG1 709 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CHMP2BQ9UQN3 213 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SLC17A4Q9Y2C5 497 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TMEM98Q9Y2Y6 226 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 MAD1L1Q9Y6D9 718 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 DNAH14Q0VDD8 3507 aa12.3□□□□□ -0.44
HLA-DQB1-203ENST00000399082 IGLV3-16A0A075B6K0 115 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 A0A1B0GTQ1 180 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SCAMP1O15126 338 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SGTAO43765 313 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GDF9O60383 454 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GFRA3O60609 400 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 DNAJC6O75061 913 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 USP1O94782 785 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SLU7O95391 586 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CSF2P04141 144 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 NME1P15531 152 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 RXRGP48443 463 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 THOP1P52888 689 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CAV1Q03135 178 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PDIA2Q13087 525 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ITGA9Q13797 1035 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CRYMQ14894 314 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 DBN1Q16643 649 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 UBAP2Q5T6F2 1119 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 STEAP4Q687X5 459 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 DOK6Q6PKX4 331 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 AFTPHQ6ULP2 937 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ENPP7Q6UWV6 458 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 KANSL1Q7Z3B3 1105 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PARGQ86W56 976 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PHYKPLQ8IUZ5 450 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ANKMY2Q8IV38 441 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 NXPE1Q8N323 547 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 MINDY1Q8N5J2 469 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 OR56A4Q8NGH8 313 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TSACCQ96A04 125 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 LRRC39Q96DD0 335 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SGSM3Q96HU1 749 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 BOCQ9BWV1 1114 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ZDHHC5Q9C0B5 715 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ANKZF1Q9H8Y5 726 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 FAM114A2Q9NRY5 505 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SAMD15Q9P1V8 674 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ATXN10Q9UBB4 475 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ST14Q9Y5Y6 855 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 RPS6KL1Q9Y6S9 549 aa12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TDRD6O60522 2096 aaKnown RBP12.29□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CABIN1Q9Y6J0 2220 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PRSS38A1L453 326 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 MAGEB16A2A368 324 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GOLGA8KD6RF30 607 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GOLGA8TH3BQL2 631 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 NDC80O14777 642 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TNFRSF10CO14798 259 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 MAGEC1O60732 1142 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms