RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 PATE1Q8WXA2 126 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 MS4A14Q96JA4 679 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PPP1R2P1Q96PQ5 205 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 UGT1A7Q9HAW7 530 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 UGT1A10Q9HAW8 530 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 UGT1A8Q9HAW9 530 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ETNK1Q9HBU6 452 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ARNT2Q9HBZ2 717 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 EVA1BQ9NVM1 165 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 RP1P56715 2156 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 SCN8AQ9UQD0 1980 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 LAMA5O15230 3695 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 IGF2RP11717 2491 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ARHGEF17Q96PE2 2063 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 STX7O15400 261 aaKnown RBP13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 AP2A1O95782 977 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ZSCAN5DPP0CG00 497 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 LPOP22079 712 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 SPAM1P38567 509 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ACTR1BP42025 376 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 KCNJ1P48048 391 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ACTR1AP61163 376 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CAMK2BQ13554 666 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 GSE1Q14687 1217 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 TAF1AQ15573 450 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PDPK2PQ6A1A2 396 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ADGRG6Q86SQ4 1221 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PHYKPLQ8IUZ5 450 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 OR4K2Q8NGD2 314 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 OR13C4Q8NGS5 318 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 MAPK15Q8TD08 544 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 BRSK1Q8TDC3 778 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CCDC74AQ96AQ1 378 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CCDC3Q9BQI4 270 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 LRRC40Q9H9A6 602 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 TRIM39Q9HCM9 518 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CLCA2Q9UQC9 943 aa13.95□□□□□ -0.18
HLA-DQB1-202ENST00000399079 MAP1BP46821 2468 aaKnown RBP13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 GLYATL1P3A0A0U1RQE8 302 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 C2orf81A6NN90 581 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CCL22O00626 93 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 NUAK1O60285 661 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 MT-CO3P00414 261 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 MAZP56270 477 aaKnown RBP13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 HLTFQ14527 1009 aaKnown RBP eCLIP13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 C14orf28Q4W4Y0 310 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 MICALCLQ6ZW33 695 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 NAGSQ8N159 534 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CCDC89Q8N998 374 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 GDAP1Q8TB36 358 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ZDHHC1Q8WTX9 485 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 NAT6Q93015 286 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 VPS35Q96QK1 796 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 RAB6BQ9NRW1 208 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 SMARCAL1Q9NZC9 954 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 FKBPLQ9UIM3 349 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PYCARDQ9ULZ3 195 aa13.94□□□□□ -0.18
HLA-DQB1-202ENST00000399079 TRABD2BA6NFA1 517 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 GRID2O43424 1007 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 LDB2O43679 373 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PPFIA2O75334 1257 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CDK14O94921 469 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ECEL1O95672 775 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 EML2O95834 649 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ACP5P13686 325 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 RPL22P35268 128 aaKnown RBP13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ACTN2P35609 894 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 GRIA1P42261 906 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 TMPRSS15P98073 1019 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 POU6F1Q14863 301 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CDCP2Q5VXM1 449 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ZDHHC20Q5W0Z9 365 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 DRICH1Q6PGQ1 229 aaPredicted RBP13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CRTC3Q6UUV7 619 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 RASGEF1CQ8N431 466 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PRELID2Q8N945 189 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 COG1Q8WTW3 980 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 MAIP1Q8WWC4 291 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 LRRC45Q96CN5 670 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 KCNK6Q9Y257 313 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 DRG1Q9Y295 367 aaKnown RBP13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ZKSCAN5Q9Y2L8 839 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 RNF215Q9Y6U7 377 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 EPG5Q9HCE0 2579 aa13.93□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ZZEF1O43149 2961 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 TRBV23OR9-2A0A075B6M9 112 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CHUKO15111 745 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 KIF5CO60282 957 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PRAMEF1O95521 474 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CRTAMO95727 393 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 GLB1P16278 677 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ZNF140P52738 457 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 XIAPP98170 497 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 TMEM115Q12893 351 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 LRP8Q14114 963 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 PLA2G4EQ3MJ16 856 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 CERCAMQ5T4B2 595 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 GSTA5Q7RTV2 222 aa13.92□□□□□ -0.18
HLA-DQB1-202ENST00000399079 ZNF547Q8IVP9 402 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms