RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 ZNF28P17035 718 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 CES1P23141 567 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 CCNCP24863 283 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 CLCNKAP51800 687 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 EPHB1P54762 984 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 EPHA4P54764 986 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 SLC10A2Q12908 348 aaPredicted RBP11.9□□□□□ -0.5
TFF3-202ENST00000398431 DPYSL3Q14195 570 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 NR1I3Q14994 352 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 IQCB1Q15051 598 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 QPCTQ16769 361 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 DEFB109BQ30KR1 87 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 CRTC2Q53ET0 693 aaPredicted RBP11.9□□□□□ -0.5
TFF3-202ENST00000398431 FAM182AQ5T1J6 154 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 ZNF648Q5T619 568 aaPredicted RBP11.9□□□□□ -0.5
TFF3-202ENST00000398431 LYSMD3Q7Z3D4 306 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 SLC9B2Q86UD5 537 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 SH3KBP1Q96B97 665 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 PLEKHG4BQ96PX9 1271 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 ZPBPQ9BS86 351 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 RBSNQ9H1K0 784 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 FAM83DQ9H4H8 585 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 RMI1Q9H9A7 625 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 PCDH9Q9HC56 1237 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 PRDM8Q9NQV8 689 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 DTLQ9NZJ0 730 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 SCHIP1Q9P0W5 487 aaPredicted RBP11.9□□□□□ -0.5
TFF3-202ENST00000398431 ATXN10Q9UBB4 475 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 CPNE7Q9UBL6 633 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 KLHL3Q9UH77 587 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 IP6K2Q9UHH9 426 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 MRPS18BQ9Y676 258 aaKnown RBP11.9□□□□□ -0.5
TFF3-202ENST00000398431 SLC30A1Q9Y6M5 507 aa11.9□□□□□ -0.5
TFF3-202ENST00000398431 ANKRD66B4E2M5 251 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 POLR1CO15160 346 aaPredicted RBP11.89□□□□□ -0.51
TFF3-202ENST00000398431 GRID2O43424 1007 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 SNX2O60749 519 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 C9P02748 559 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 ZNF8P17098 575 aaPredicted RBP11.89□□□□□ -0.51
TFF3-202ENST00000398431 SLC19A1P41440 591 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 ZNF165P49910 485 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 GFERP55789 205 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 RPL26P61254 145 aaKnown RBP11.89□□□□□ -0.51
TFF3-202ENST00000398431 UBE2IP63279 158 aaKnown RBP11.89□□□□□ -0.51
TFF3-202ENST00000398431 KRT81Q14533 505 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 IFI16Q16666 785 aaKnown RBP11.89□□□□□ -0.51
TFF3-202ENST00000398431 ANKRD20A8PQ5CZ79 823 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 CCDC122Q5T0U0 273 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 PQLC3Q8N755 202 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 CNTD1Q8N815 330 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 LPCAT1Q8NF37 534 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 C9orf43Q8TAL5 461 aaPredicted RBP11.89□□□□□ -0.51
TFF3-202ENST00000398431 APOBEC4Q8WW27 367 aaKnown RBP11.89□□□□□ -0.51
TFF3-202ENST00000398431 STARD8Q92502 1023 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 RNF31Q96EP0 1072 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 HERPUD2Q9BSE4 406 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 EFHD1Q9BUP0 239 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 NUP85Q9BW27 656 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 CARD9Q9H257 536 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 TRIT1Q9H3H1 467 aaKnown RBP11.89□□□□□ -0.51
TFF3-202ENST00000398431 CBX8Q9HC52 389 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 ARFGAP3Q9NP61 516 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 ZNF624Q9P2J8 865 aaPredicted RBP11.89□□□□□ -0.51
TFF3-202ENST00000398431 SLC23A2Q9UGH3 650 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 AMACRQ9UHK6 382 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 ANAPC7Q9UJX3 599 aa11.89□□□□□ -0.51
TFF3-202ENST00000398431 RPL26L1Q9UNX3 145 aaKnown RBP11.89□□□□□ -0.51
TFF3-202ENST00000398431 MN1Q10571 1320 aaPredicted RBP11.88□□□□□ -0.51
TFF3-202ENST00000398431 A0A087X0T9 212 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 KIR2DS5A0A0G2JLQ3 304 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 A0A0G2JNG1 304 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 C1orf232A0A0U1RR37 186 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 RGSL1A5PLK6 1076 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 LILRA5A6NI73 299 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 PRR19A6NJB7 356 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 OR5K4A6NMS3 321 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 KIR2DS3K7RE56 304 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 FURINP09958 794 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 ANKRD34CP0C6C1 535 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 FAM228BP0C875 321 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 XRCC1P18887 633 aaPredicted RBP11.88□□□□□ -0.51
TFF3-202ENST00000398431 TCN2P20062 427 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 STAT5AP42229 794 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 MAPK9P45984 424 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 PPM1FP49593 454 aaPredicted RBP11.88□□□□□ -0.51
TFF3-202ENST00000398431 TAS2R40P59535 323 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 GBE1Q04446 702 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 MAP7Q14244 749 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 KIR2DS5Q14953 304 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 FIGNQ5HY92 759 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 TIGD7Q6NT04 549 aaPredicted RBP11.88□□□□□ -0.51
TFF3-202ENST00000398431 C16orf46Q6P387 395 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 KDELC2Q7Z4H8 507 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 ADGRG6Q86SQ4 1221 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 KIAA1143Q96AT1 154 aaPredicted RBP11.88□□□□□ -0.51
TFF3-202ENST00000398431 FAF2Q96CS3 445 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 C9orf72Q96LT7 481 aa11.88□□□□□ -0.51
TFF3-202ENST00000398431 MLPHQ9BV36 600 aaPredicted RBP11.88□□□□□ -0.51
TFF3-202ENST00000398431 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.88□□□□□ -0.51
TFF3-202ENST00000398431 NAT10Q9H0A0 1025 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms