RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 NKAPQ8N5F7 415 aaKnown RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 CAMKK1Q8N5S9 505 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 GPR62Q9BZJ7 368 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 LEF1Q9UJU2 399 aaPredicted RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 CDV3Q9UKY7 258 aaKnown RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 DDX60LQ5H9U9 1706 aaKnown RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 PHLPP1O60346 1717 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 A0A0U1RQF3 1178 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 A0A1B0GTW7 788 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 IQCF5A8MTL0 148 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 BPNT1O95861 308 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 ALPIP09923 528 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 ITGALP20701 1170 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 NR4A1P22736 598 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 MAGEA12P43365 314 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 ADARP55265 1226 aaKnown RBP4.9□□□□□ -1.62
SMAD4-202ENST00000398417 SCAPQ12770 1279 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 RAB41Q5JT25 222 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 HMBOX1Q6NT76 420 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 PSAPL1Q6NUJ1 521 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 CCDC81Q6ZN84 652 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 CEP19Q96LK0 163 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 SCN7AQ01118 1682 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 ICE1Q9Y2F5 2266 aa4.9□□□□□ -1.62
SMAD4-202ENST00000398417 TCAF2A6NFQ2 919 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 MANSC4A6NHS7 340 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 PPP1R2P9O14990 202 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 ARPC2O15144 300 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 HTRA2O43464 458 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 OR1I1O60431 355 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 SERPINI2O75830 405 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 CDH2P19022 906 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 PBLDP30039 288 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 CCND3P30281 292 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 GGT5P36269 586 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 POLD2P49005 469 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 RPL34P49207 117 aaKnown RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 SEMA3BQ13214 749 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 NFE2Q16621 373 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 LUZP2Q86TE4 346 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 GPSM1Q86YR5 675 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 CPNE9Q8IYJ1 553 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 PSMA8Q8TAA3 256 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 ITFG2Q969R8 447 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 ZFRQ96KR1 1074 aaKnown RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 ZBTB26Q9HCK0 441 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 CIDEBQ9UHD4 219 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 RAI2Q9Y5P3 530 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 TLR5O60602 858 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 GJB5O95377 273 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 HLA-DPA1P20036 260 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 FDXRP22570 491 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 MAP4P27816 1152 aaKnown RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 HALP42357 657 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 FLT3LGP49771 235 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 PER3P56645 1201 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 C1QTNF8P60827 252 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 ARHGEF7Q14155 803 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 UPP1Q16831 310 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 RGMBQ6NW40 437 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 RANBP10Q6VN20 620 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 SZRD1Q7Z422 152 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 TMEM102Q8N9M5 508 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 AARSD1Q9BTE6 412 aaKnown RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 RIBC2Q9H4K1 309 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 TFB2MQ9H5Q4 396 aaKnown RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 LATS2Q9NRM7 1088 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 SEPT3Q9UH03 358 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 HS6ST1O60243 411 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 MAN1A2O60476 641 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 FKBP9O95302 570 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 KCNJ5P48544 419 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 CDKN1CP49918 316 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 CHRNB3Q05901 458 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 IL10RBQ08334 325 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 VAC14Q08AM6 782 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 IKBKEQ14164 716 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 PCBP1Q15365 356 aaKnown RBP eCLIP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 CHSY3Q70JA7 882 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 FKBP9P1Q75LS8 142 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 ST13P5Q8NFI4 369 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 TRIB2Q92519 343 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 FBXO44Q9H4M3 255 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 GSTO2Q9H4Y5 243 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 ARMC7Q9H6L4 198 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 HCSTQ9UBK5 93 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 RSL24D1Q9UHA3 163 aaKnown RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 SPO11Q9Y5K1 396 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 SHANK3Q9BYB0 1731 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 DHRS12A0PJE2 317 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 H7C4K7 107 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 CDC40O60508 579 aaKnown RBP eCLIP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 DEAF1O75398 565 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 UGT1A1P22309 533 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 UGT1A4P22310 534 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 MZF1P28698 734 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 ADSLP30566 484 aaPredicted RBP4.9□□□□□ -1.63
SMAD4-202ENST00000398417 UGT1A3P35503 534 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 UGT1A5P35504 534 aa4.9□□□□□ -1.63
SMAD4-202ENST00000398417 CREB5Q02930 508 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms