RNA–Protein interactions for RNA: ENST00000397893.3

SUMO3-202, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-202ENST00000397893 PPIL6Q8IXY8 311 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 ARHGAP24Q8N264 748 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 ZNF548Q8NEK5 533 aaPredicted RBP6.94□□□□□ -1.3
SUMO3-202ENST00000397893 ARMC2Q8NEN0 867 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 FAM174AQ8TBP5 190 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 DENND1AQ8TEH3 1009 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 PYROXD1Q8WU10 500 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 C10orf82Q8WW14 230 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 FGF11Q92914 225 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 MRRFQ96E11 262 aaKnown RBP6.94□□□□□ -1.3
SUMO3-202ENST00000397893 SPDL1Q96EA4 605 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 NAF1Q96HR8 494 aaKnown RBP6.94□□□□□ -1.3
SUMO3-202ENST00000397893 HIC2Q96JB3 615 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 FEM1CQ96JP0 617 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 APOLD1Q96LR9 279 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 LENG8Q96PV6 779 aaPredicted RBP6.94□□□□□ -1.3
SUMO3-202ENST00000397893 NUDCD1Q96RS6 583 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 HERPUD2Q9BSE4 406 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 TRIM55Q9BYV6 548 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 KLC2Q9H0B6 622 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 MAGEH1Q9H213 219 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 ATP13A1Q9HD20 1204 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 METTL5Q9NRN9 209 aaKnown RBP6.94□□□□□ -1.3
SUMO3-202ENST00000397893 TMEM248Q9NWD8 314 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 NLGN3Q9NZ94 848 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 OR12D3Q9UGF7 316 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 LNPEPQ9UIQ6 1025 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 CHKBQ9Y259 395 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 PCDHB1Q9Y5F3 818 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 IKBKGQ9Y6K9 419 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 ATMQ13315 3056 aa6.94□□□□□ -1.3
SUMO3-202ENST00000397893 TENM4Q6N022 2769 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 hCG_1818297A0A087WSY0 165 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 LRRD1A4D1F6 860 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 C16orf96A6NNT2 1141 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 FFAR2O15552 330 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 TSPAN6O43657 245 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 KDELR3O43731 214 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 CCDC22O60826 627 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 PEX11AO75192 247 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 DXOO77932 396 aaKnown RBP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 GSRP00390 522 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 IFNB1P01574 187 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 GP1BAP07359 652 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 ATP6V1C1P21283 382 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 RPA3P35244 121 aaPredicted RBP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 RFC1P35251 1148 aaPredicted RBP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 ABCG1P45844 678 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 RECQLP46063 649 aaPredicted RBP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 HNRNPKP61978 463 aaKnown RBP eCLIP6.93□□□□□ -1.32e-6■■■■□ 19.4
SUMO3-202ENST00000397893 TLE3Q04726 772 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 HADHQ16836 314 aaKnown RBP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 MYLK3Q32MK0 819 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 TBC1D25Q3MII6 688 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 TAF1BQ53T94 588 aaPredicted RBP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 ZNF805Q5CZA5 627 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 TFDP3Q5H9I0 405 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 RNASEH2BQ5TBB1 312 aaKnown RBP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 MFSD7Q6UXD7 560 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 PRUNE1Q86TP1 453 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 TRIM42Q8IWZ5 723 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 PALM2Q8IXS6 379 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 KIRREL3Q8IZU9 778 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 CCDC185Q8N715 623 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 ENDOVQ8N8Q3 282 aaKnown RBP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 PPFIBP2Q8ND30 876 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 FAM13CQ8NE31 585 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 OR2AP1Q8NGE2 309 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 ZNF75CPQ92670 426 aaPredicted RBP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 STMN2Q93045 179 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 NTAN1Q96AB6 310 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 MCUR1Q96AQ8 359 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 PPP1R16AQ96I34 528 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 DCBLD2Q96PD2 775 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 MCEEQ96PE7 176 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 UBL7Q96S82 380 aaPredicted RBP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 CALN1Q9BXU9 219 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 TM6SF2Q9BZW4 377 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 VCXQ9H320 206 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 TCEAL2Q9H3H9 227 aaPredicted RBP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 NPHS2Q9NP85 383 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 SPATS2LQ9NUQ6 558 aaKnown RBP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 ZFATQ9P243 1243 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 STOML1Q9UBI4 398 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 DNPEPQ9ULA0 475 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 ITM2BQ9Y287 266 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 MTO1Q9Y2Z2 717 aaKnown RBP6.93□□□□□ -1.3
SUMO3-202ENST00000397893 MFHAS1Q9Y4C4 1052 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 AK5Q9Y6K8 562 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 CSNK1G3Q9Y6M4 447 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 COL6A6A6NMZ7 2263 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 MAST4O15021 2626 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 TRPM6Q9BX84 2022 aa6.93□□□□□ -1.3
SUMO3-202ENST00000397893 DOCK4Q8N1I0 1966 aa6.92□□□□□ -1.3
SUMO3-202ENST00000397893 EME2A4GXA9 379 aaPredicted RBP6.92□□□□□ -1.3
SUMO3-202ENST00000397893 TMEM191CA6NGB0 347 aa6.92□□□□□ -1.3
SUMO3-202ENST00000397893 SIGLEC16A6NMB1 481 aa6.92□□□□□ -1.3
SUMO3-202ENST00000397893 WASH4PA8MWX3 477 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms