RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 C6orf52Q5T4I8 152 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 FBXO39Q8N4B4 442 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ADCY4Q8NFM4 1077 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 STAG3L4Q8TBR4 150 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RAET1EQ8TD07 263 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 KIAA1191Q96A73 305 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TUBGCP3Q96CW5 907 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 AGO1Q9UL18 857 aaKnown RBP18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TIMM22Q9Y584 194 aa18.24■□□□□ 0.51
CHRFAM7A-202ENST00000397827 GPR39O43194 453 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 KERAO60938 352 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ECI2O75521 394 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CDKL1Q00532 357 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CLCQ05315 142 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TAF1AQ15573 450 aaPredicted RBP18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 KANK2Q63ZY3 851 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 AFTPHQ6ULP2 937 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SYTL2Q9HCH5 934 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 COMMD8Q9NX08 183 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TMEM181Q9P2C4 612 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CD300AQ9UGN4 299 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 FKBPLQ9UIM3 349 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 AP4S1Q9Y587 144 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 NPEPPSL1A6NEC2 478 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 C2orf81A6NN90 581 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 BOLA2-SMG1P6H3BVE0 249 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 DENRO43583 198 aaKnown RBP18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 NIPSNAP2O75323 286 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 PRDX3P30048 256 aaKnown RBP18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 AGTR2P50052 363 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 C6orf10Q5SRN2 563 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 LRTOMTQ8WZ04 291 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 BIRC8Q96P09 236 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RNF38Q9H0F5 515 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RIMKLBQ9ULI2 386 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RAI2Q9Y5P3 530 aa18.23■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 BTN3A1O00481 513 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CLDN11O75508 207 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 STC2O76061 302 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 PGM3O95394 542 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 HGFP14210 728 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ACADVLP49748 655 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 YBX1P67809 324 aaKnown RBP18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SMARCB1Q12824 385 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ZNF177Q13360 481 aaPredicted RBP18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 NRF1Q16656 503 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 HECTD3Q5T447 861 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CCDC80Q76M96 950 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 PHYKPLQ8IUZ5 450 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 MARVELD2Q8N4S9 558 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SIDT2Q8NBJ9 832 aaKnown RBP18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 DERL2Q9GZP9 239 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 MUC3BQ9H195 1237 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 POLG2Q9UHN1 485 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TDRKHQ9Y2W6 561 aaKnown RBP18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ANKRD36A6QL64 1941 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 LCHNA4D1U4 455 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SNAP91O60641 907 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 PIM1P11309 404 aaPredicted RBP18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 MC4RP32245 332 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RHDQ02161 417 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RAD51Q06609 339 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ELAVL2Q12926 359 aaKnown RBP18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RNF219Q5W0B1 726 aaPredicted RBP18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 C8orf82Q6P1X6 216 aaPredicted RBP18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 NPAS4Q8IUM7 802 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TMEM126BQ8IUX1 230 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 FUBP1Q96AE4 644 aaKnown RBP18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 EME1Q96AY2 570 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SLCO4A1Q96BD0 722 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ASB2Q96Q27 587 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 MAP10Q9P2G4 905 aa18.22■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CHRM3P20309 590 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CAPN3P20807 821 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SLC15A3Q8IY34 581 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TRIM8Q9BZR9 551 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 MRPL40Q9NQ50 206 aaKnown RBP18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 APPL1Q9UKG1 709 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 MYOCOSA0A1B0GUC4 107 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SEC24AO95486 1093 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 C8BP07358 591 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CD97P48960 835 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ATP4BP51164 291 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 DIO3P55073 304 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RPL26P61254 145 aaKnown RBP18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 ARF5P84085 180 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 LCP2Q13094 533 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 UGT3A1Q6NUS8 523 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SCIMPQ6UWF3 145 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 DCBLD1Q8N8Z6 715 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 CATSPER1Q8NEC5 780 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 FAM110BQ8TC76 370 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 C2orf15Q8WU43 125 aaKnown RBP18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SCLYQ96I15 445 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TSEN34Q9BSV6 310 aaKnown RBP18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 PFDN4Q9NQP4 134 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 SMPD4Q9NXE4 827 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 RAB26Q9ULW5 256 aa18.21■□□□□ 0.51
CHRFAM7A-202ENST00000397827 TMEM98Q9Y2Y6 226 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms