RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 GPR1P46091 355 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 IL10RBQ08334 325 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 SMTNL2Q2TAL5 461 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 ADAMTSL4Q6UY14 1074 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 ZNF517Q6ZMY9 492 aaPredicted RBP9.32□□□□□ -0.92
NEDD9-203ENST00000397378 TECPR1Q7Z6L1 1165 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 NLRP8Q86W28 1048 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 PHF13Q86YI8 300 aaPredicted RBP9.32□□□□□ -0.92
NEDD9-203ENST00000397378 GALNT13Q8IUC8 556 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 PLXDC1Q8IUK5 500 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 ARHGAP12Q8IWW6 846 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 GLIS1Q8NBF1 620 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 ST6GALNAC3Q8NDV1 305 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 SCRN2Q96FV2 425 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 EIF3CQ99613 913 aaKnown RBP9.32□□□□□ -0.92
NEDD9-203ENST00000397378 TUBGCP2Q9BSJ2 902 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 TRIM8Q9BZR9 551 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 ILKAPQ9H0C8 392 aaPredicted RBP9.32□□□□□ -0.92
NEDD9-203ENST00000397378 STN1Q9H668 368 aaKnown RBP9.32□□□□□ -0.92
NEDD9-203ENST00000397378 SP110Q9HB58 689 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 AGPAT4Q9NRZ5 378 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 GOLGA6AQ9NYA3 693 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 GPR83Q9NYM4 423 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 ADAM22Q9P0K1 906 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 KIAA1468Q9P260 1216 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 PADI1Q9ULC6 663 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 B3GNT3Q9Y2A9 372 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 TACC2O95359 2948 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 TRBV23OR9-2A0A075B6M9 112 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 TCRBV5S1A1TA0A578 114 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 GOLGA6L3A6NEY3 463 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 NPIPB15A6NHN6 443 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-203ENST00000397378 C21orf140B9A014 251 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 PRICKLE3O43900 615 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-203ENST00000397378 CEACAM4O75871 244 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 GFPT2O94808 682 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 EML2O95834 649 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 CPP00450 1065 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 C9P02748 559 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 CALB1P05937 261 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 PYGLP06737 847 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 CD99P14209 185 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 SLC2A4P14672 509 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 HSPA9P38646 679 aaKnown RBP9.31□□□□□ -0.92
NEDD9-203ENST00000397378 NSFP46459 744 aaKnown RBP9.31□□□□□ -0.92
NEDD9-203ENST00000397378 GLRBP48167 497 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 ART3Q13508 389 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 IL10RAQ13651 578 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 RAPSNQ13702 412 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 IL11RAQ14626 422 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 TPD52L1Q16890 204 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-203ENST00000397378 VWA2Q5GFL6 755 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 TMCO4Q5TGY1 634 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 DENND2CQ68D51 928 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 IYDQ6PHW0 289 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 DOK6Q6PKX4 331 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 ZNF765Q7L2R6 523 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 SLC9B2Q86UD5 537 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 MLKLQ8NB16 471 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 AVL9Q8NBF6 648 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 HDAC11Q96DB2 347 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 COX14Q96I36 57 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 ZNF599Q96NL3 588 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 OR6C1Q96RD1 312 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 MCCC1Q96RQ3 725 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-203ENST00000397378 RUFY1Q96T51 708 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 HERPUD2Q9BSE4 406 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 CNPY3Q9BT09 278 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-203ENST00000397378 ABCG8Q9H221 673 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 CHST11Q9NPF2 352 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 LHX9Q9NQ69 397 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 TMEM98Q9Y2Y6 226 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 PPIL1Q9Y3C6 166 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 PCDHGC4Q9Y5F7 938 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 KLF2Q9Y5W3 355 aaPredicted RBP9.31□□□□□ -0.92
NEDD9-203ENST00000397378 POLEQ07864 2286 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 DCHS2Q6V1P9 2916 aa9.31□□□□□ -0.92
NEDD9-203ENST00000397378 KIR2DS5A0A0G2JLQ3 304 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 A0A0G2JNG1 304 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 A0A1B0GUH1 482 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 ANKRD62A6NC57 917 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 LILRA5A6NI73 299 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 OR5K4A6NMS3 321 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 KIR2DS3K7RE56 304 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 EEF2KO00418 725 aaKnown RBP9.3□□□□□ -0.92
NEDD9-203ENST00000397378 TOX3O15405 576 aaPredicted RBP9.3□□□□□ -0.92
NEDD9-203ENST00000397378 DNAJC6O75061 913 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 MT-ND3P03897 115 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 SPTBP11277 2137 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 CAPN3P20807 821 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 SSTR2P30874 369 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 SOX5P35711 763 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 KRTAP10-9P60411 292 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 RPL7AP62424 266 aaKnown RBP9.3□□□□□ -0.92
NEDD9-203ENST00000397378 RPS15P62841 145 aaKnown RBP9.3□□□□□ -0.92
NEDD9-203ENST00000397378 SLC10A7Q0GE19 358 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 NFATC2Q13469 925 aa9.3□□□□□ -0.92
NEDD9-203ENST00000397378 LBRQ14739 615 aaKnown RBP9.3□□□□□ -0.92
NEDD9-203ENST00000397378 KIR2DS5Q14953 304 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms