RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 FBXO39Q8N4B4 442 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 SIDT2Q8NBJ9 832 aaKnown RBP23.62■■□□□ 1.37
PABPN1-202ENST00000397276 HHIPL1Q96JK4 782 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 PCDH10Q9P2E7 1040 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 GMPR2Q9P2T1 348 aaKnown RBP23.62■■□□□ 1.37
PABPN1-202ENST00000397276 ILVBLA1L0T0 632 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 NPEPPSL1A6NEC2 478 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 ANKRD66B4E2M5 251 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 BTN3A1O00481 513 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 TRIM38O00635 465 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 AZIN1O14977 448 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 HOXA2O43364 376 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 AGTR2P50052 363 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 ADGRE1Q14246 886 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 CYP2R1Q6VVX0 501 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 STAG3L4Q8TBR4 150 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 ABTB1Q969K4 478 aaPredicted RBP23.62■■□□□ 1.37
PABPN1-202ENST00000397276 ATP6V1E2Q96A05 226 aa23.62■■□□□ 1.37
PABPN1-202ENST00000397276 INTS10Q9NVR2 710 aaKnown RBP23.62■■□□□ 1.37
PABPN1-202ENST00000397276 A0A1B0GVM2 712 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 PRORSD1PA6NEY8 169 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 IQCF5A8MTL0 148 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 STX1BP61266 288 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 MAPRE2Q15555 327 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 FUNDC1Q8IVP5 155 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 LRCH3Q96II8 777 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 TFB2MQ9H5Q4 396 aaKnown RBP23.61■■□□□ 1.37
PABPN1-202ENST00000397276 SYTL2Q9HCH5 934 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 CHCHD3Q9NX63 227 aaKnown RBP23.61■■□□□ 1.37
PABPN1-202ENST00000397276 H0Y626 953 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 NRP2O60462 931 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 ECI2O75521 394 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 LPOP22079 712 aaPredicted RBP23.61■■□□□ 1.37
PABPN1-202ENST00000397276 RAD51Q06609 339 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 TRAF2Q12933 501 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 CXorf57Q6NSI4 855 aaKnown RBP23.61■■□□□ 1.37
PABPN1-202ENST00000397276 DCBLD1Q8N8Z6 715 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 PDZD8Q8NEN9 1154 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 OR6K2Q8NGY2 324 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 TMIGD2Q96BF3 282 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 TUBGCP3Q96CW5 907 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 TUBB1Q9H4B7 451 aa23.61■■□□□ 1.37
PABPN1-202ENST00000397276 UTP6Q9NYH9 597 aaKnown RBP23.61■■□□□ 1.37
PABPN1-202ENST00000397276 BMP1P13497 986 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 PRDX3P30048 256 aaKnown RBP23.6■■□□□ 1.37
PABPN1-202ENST00000397276 CLCQ05315 142 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 NRF1Q16656 503 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 DEFB115Q30KQ5 88 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 RARS2Q5T160 578 aaKnown RBP23.6■■□□□ 1.37
PABPN1-202ENST00000397276 SCIMPQ6UWF3 145 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 TAS2R42Q7RTR8 314 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 RHEBL1Q8TAI7 183 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 KIAA1191Q96A73 305 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 BIRC8Q96P09 236 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 SLC22A12Q96S37 553 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 BCAP29Q9UHQ4 241 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 FCF1Q9Y324 198 aaKnown RBP23.6■■□□□ 1.37
PABPN1-202ENST00000397276 NR5A2O00482 541 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 CD160O95971 181 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 F11P03951 625 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 CHRM3P20309 590 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 MTA1Q13330 715 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 TMEM259Q4ZIN3 620 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 ATXN7L2Q5T6C5 722 aaPredicted RBP23.6■■□□□ 1.37
PABPN1-202ENST00000397276 IL23RQ5VWK5 629 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 TICAM1Q8IUC6 712 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 AUTS2Q8WXX7 1259 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 MRPS26Q9BYN8 205 aaKnown RBP23.6■■□□□ 1.37
PABPN1-202ENST00000397276 UNC93B1Q9H1C4 597 aa23.6■■□□□ 1.37
PABPN1-202ENST00000397276 STX7O15400 261 aaKnown RBP23.59■■□□□ 1.37
PABPN1-202ENST00000397276 TBL1XO60907 577 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 CRCPO75575 148 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 PRAMEF12O95522 483 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 CTPS1P17812 591 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 PLD4Q96BZ4 506 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 SLC25A23Q9BV35 468 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 SEMA6AQ9H2E6 1030 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 RAB26Q9ULW5 256 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 PCDHB9Q9Y5E1 797 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 KERAO60938 352 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 TNFAIP8O95379 198 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 HOXB8P17481 243 aaPredicted RBP23.59■■□□□ 1.37
PABPN1-202ENST00000397276 RPL26P61254 145 aaKnown RBP23.59■■□□□ 1.37
PABPN1-202ENST00000397276 TRIM25Q14258 630 aaKnown RBP23.59■■□□□ 1.37
PABPN1-202ENST00000397276 VPS26BQ4G0F5 336 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 ZNF461Q8TAF7 563 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 EEF1AKMT1Q8WVE0 214 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 GAB3Q8WWW8 586 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 IGSF21Q96ID5 467 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 FAM210AQ96ND0 272 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 POPDC3Q9HBV1 291 aa23.59■■□□□ 1.37
PABPN1-202ENST00000397276 ARIH1Q9Y4X5 557 aaPredicted RBP23.59■■□□□ 1.37
PABPN1-202ENST00000397276 A0A0J9YYE9 177 aa23.58■■□□□ 1.37
PABPN1-202ENST00000397276 RNASEH2AO75792 299 aaKnown RBP23.58■■□□□ 1.37
PABPN1-202ENST00000397276 MBL2P11226 248 aaPredicted RBP23.58■■□□□ 1.37
PABPN1-202ENST00000397276 EMP3P54852 163 aa23.58■■□□□ 1.37
PABPN1-202ENST00000397276 SNRNP27Q8WVK2 155 aaKnown RBP23.58■■□□□ 1.37
PABPN1-202ENST00000397276 FUBP1Q96AE4 644 aaKnown RBP23.58■■□□□ 1.37
PABPN1-202ENST00000397276 ASB9Q96DX5 294 aa23.58■■□□□ 1.37
PABPN1-202ENST00000397276 DERL2Q9GZP9 239 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms