RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 PSMC3IPQ9P2W1 217 aaPredicted RBP13.2□□□□□ -0.3
SEC13-209ENST00000397117 EIF2B4Q9UI10 523 aaKnown RBP13.2□□□□□ -0.3
SEC13-209ENST00000397117 PPIL1Q9Y3C6 166 aa13.2□□□□□ -0.3
SEC13-209ENST00000397117 ANKRD36A6QL64 1941 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 SETXQ7Z333 2677 aaKnown RBP13.19□□□□□ -0.3
SEC13-209ENST00000397117 A0A1B0GVT2 93 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 TSPAN11A1L157 253 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 CXorf49A8MYA2 514 aaPredicted RBP13.19□□□□□ -0.3
SEC13-209ENST00000397117 GOLGA8KD6RF30 607 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 AURKAO14965 403 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 C7P10643 843 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 CYP2A6P11509 494 aaPredicted RBP13.19□□□□□ -0.3
SEC13-209ENST00000397117 ITGB7P26010 798 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 ZNF140P52738 457 aaPredicted RBP13.19□□□□□ -0.3
SEC13-209ENST00000397117 CAMK2BQ13554 666 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 PTPRRQ15256 657 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 ERAP2Q6P179 960 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 LYSMD3Q7Z3D4 306 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 SLC26A11Q86WA9 606 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 TDRPQ86YL5 185 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 MMAAQ8IVH4 418 aaKnown RBP13.19□□□□□ -0.3
SEC13-209ENST00000397117 OTUD6BQ8N6M0 293 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 OR4K2Q8NGD2 314 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 OR13J1Q8NGT2 312 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 RHBDD1Q8TEB9 315 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 SLC44A1Q8WWI5 657 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 HDAC10Q969S8 669 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 MCCC1Q96RQ3 725 aaPredicted RBP13.19□□□□□ -0.3
SEC13-209ENST00000397117 LYSMD1Q96S90 227 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 TMBIM4Q9HC24 238 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 IARS2Q9NSE4 1012 aaKnown RBP13.19□□□□□ -0.3
SEC13-209ENST00000397117 NLE1Q9NVX2 485 aaPredicted RBP13.19□□□□□ -0.3
SEC13-209ENST00000397117 NSMCE4AQ9NXX6 385 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 TBK1Q9UHD2 729 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 SARDHQ9UL12 918 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 SLCO1B1Q9Y6L6 691 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 SMG1Q96Q15 3661 aaKnown RBP13.19□□□□□ -0.3
SEC13-209ENST00000397117 MUC22E2RYF6 1773 aaPredicted RBP13.19□□□□□ -0.3
SEC13-209ENST00000397117 LOC400499M0QZD8 3231 aa13.19□□□□□ -0.3
SEC13-209ENST00000397117 CELSR3Q9NYQ7 3312 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 TRABD2BA6NFA1 517 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 NPIPB15A6NHN6 443 aaPredicted RBP13.18□□□□□ -0.3
SEC13-209ENST00000397117 A8MX80 341 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 H3BQF6 201 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 GOLGA8TH3BQL2 631 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 FLRT2O43155 660 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 SLC7A4O43246 635 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 SYF2O95926 243 aaKnown RBP13.18□□□□□ -0.3
SEC13-209ENST00000397117 TIMP2P16035 220 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 ATP5DP30049 168 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 HMGCLP35914 325 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 HADHAP40939 763 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 ARCN1P48444 511 aaKnown RBP13.18□□□□□ -0.3
SEC13-209ENST00000397117 PSMD8P48556 350 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 CSNK1EP49674 416 aaKnown RBP13.18□□□□□ -0.3
SEC13-209ENST00000397117 CAMK2GQ13555 558 aaPredicted RBP13.18□□□□□ -0.3
SEC13-209ENST00000397117 ARHGEF7Q14155 803 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 PTPRCAPQ14761 206 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 TMED2Q15363 201 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 LRRC73Q5JTD7 316 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 LGSNQ5TDP6 509 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 FBXL19Q6PCT2 694 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 TAOK1Q7L7X3 1001 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 MARCH9Q86YJ5 346 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 TTC30BQ8N4P2 665 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 OR13C4Q8NGS5 318 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 CALML6Q8TD86 181 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 PGM2Q96G03 612 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 FAM167BQ9BTA0 163 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 PCDH12Q9NPG4 1184 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 SMYD2Q9NRG4 433 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 BTBD3Q9Y2F9 522 aa13.18□□□□□ -0.3
SEC13-209ENST00000397117 CCL22O00626 93 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 CLDN7O95471 211 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 C1QAP02745 245 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 GCAP28676 217 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 ACVR1Q04771 509 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 CYP4F3Q08477 520 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 RASA2Q15283 850 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 KIF19Q2TAC6 998 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 TEDDM1Q5T9Z0 273 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 NEPROQ6NW34 567 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 ADGRD1Q6QNK2 874 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 CRTC1Q6UUV9 634 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 MARK2Q7KZI7 788 aaKnown RBP13.17□□□□□ -0.3
SEC13-209ENST00000397117 PARS2Q7L3T8 475 aaKnown RBP13.17□□□□□ -0.3
SEC13-209ENST00000397117 ARL8AQ96BM9 186 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 ATP6V1G3Q96LB4 118 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 TBATAQ96M53 351 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 AGAP2Q99490 1192 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 CPNE1Q99829 537 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 DHRS4Q9BTZ2 278 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 FBRSQ9HAH7 460 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 BPIFA1Q9NP55 256 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 CTNNAL1Q9UBT7 734 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 B4GALT6Q9UBX8 382 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 LGALS13Q9UHV8 139 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 TP53BP1Q12888 1972 aaPredicted RBP13.17□□□□□ -0.3
SEC13-209ENST00000397117 A0A0U1RQS6 177 aa13.17□□□□□ -0.3
SEC13-209ENST00000397117 IQANK1A0A1B0GTG1 560 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms