RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 RHOXF2Q9BQY4 288 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 ZSCAN5AQ9BUG6 496 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 SUDS3Q9H7L9 328 aaPredicted RBP14.45□□□□□ -0.1
SEC13-208ENST00000397109 RMI1Q9H9A7 625 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 OGFRQ9NZT2 677 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 VPS18Q9P253 973 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 CNOT6Q9ULM6 557 aaKnown RBP14.45□□□□□ -0.1
SEC13-208ENST00000397109 TMEM98Q9Y2Y6 226 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 GPSM3Q9Y4H4 160 aa14.45□□□□□ -0.1
SEC13-208ENST00000397109 URB1O60287 2271 aaKnown RBP14.45□□□□□ -0.1
SEC13-208ENST00000397109 KCNN4O15554 427 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 PNLIPP16233 465 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 GLB1P16278 677 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 CYP4F3Q08477 520 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 LRP8Q14114 963 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 SIX1Q15475 284 aaPredicted RBP14.44□□□□□ -0.1
SEC13-208ENST00000397109 SLC1A5Q15758 541 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 C14orf28Q4W4Y0 310 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 ANKRD20A2Q5SQ80 823 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 ANKRD20A1Q5TYW2 823 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 ANKRD20A3Q5VUR7 823 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 ZDHHC20Q5W0Z9 365 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 C8orf74Q6P047 294 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 NRROSQ86YC3 692 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 GALNT13Q8IUC8 556 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 TRAM1L1Q8N609 369 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 IPMKQ8NFU5 416 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 MDM1Q8TC05 714 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 EID2BQ96D98 161 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 CCDC3Q9BQI4 270 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 SPATA16Q9BXB7 569 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 FSD1LQ9BXM9 530 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 C10orf88Q9H8K7 445 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.44□□□□□ -0.14e-32■■■■□ 25.9
SEC13-208ENST00000397109 TAAR2Q9P1P5 351 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 AAR2Q9Y312 384 aaKnown RBP14.44□□□□□ -0.1
SEC13-208ENST00000397109 UNC13CQ8NB66 2214 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 ANKRD11Q6UB99 2663 aaPredicted RBP14.44□□□□□ -0.1
SEC13-208ENST00000397109 TCRBV7S2A1N4TA0A589 114 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 FADS2P1A8MWK0 482 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 B4DGG1 531 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 NOBOXO60393 691 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 CSO75390 466 aaKnown RBP14.44□□□□□ -0.1
SEC13-208ENST00000397109 FGGP02679 453 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 FGF1P05230 155 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 HMGCLP35914 325 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 CTBSQ01459 385 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 C2orf54Q08AI8 447 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 PYCR3Q53H96 274 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 SIRPB2Q5JXA9 342 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 BEND6Q5SZJ8 279 aaPredicted RBP14.44□□□□□ -0.1
SEC13-208ENST00000397109 RBM44Q6ZP01 1051 aaKnown RBP14.44□□□□□ -0.1
SEC13-208ENST00000397109 HDXQ7Z353 690 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 MAATS1Q7Z4T9 603 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 TRIM74Q86UV6 250 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 GPR26Q8NDV2 337 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 ZDHHC1Q8WTX9 485 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 MAIP1Q8WWC4 291 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 CCDC74AQ96AQ1 378 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 LRRC45Q96CN5 670 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 MS4A14Q96JA4 679 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 SPATA13Q96N96 652 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 RUNDC3BQ96NL0 473 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 PLEKHG4BQ96PX9 1271 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 FRMD8P1Q9BZ68 369 aaPredicted RBP14.44□□□□□ -0.1
SEC13-208ENST00000397109 FAM53CQ9NYF3 392 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 APPL1Q9UKG1 709 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 AK5Q9Y6K8 562 aa14.44□□□□□ -0.1
SEC13-208ENST00000397109 KMT2BQ9UMN6 2715 aaPredicted RBP14.43□□□□□ -0.1
SEC13-208ENST00000397109 GOLGA6L10A0A0M3HER8 536 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 SRRM3A6NNA2 597 aaPredicted RBP14.43□□□□□ -0.1
SEC13-208ENST00000397109 GPR89AB7ZAQ6 455 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 F5H423 210 aaPredicted RBP14.43□□□□□ -0.1
SEC13-208ENST00000397109 ZW10O43264 779 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 NUDT21O43809 227 aaKnown RBP14.43□□□□□ -0.1
SEC13-208ENST00000397109 SLC25A14O95258 325 aaPredicted RBP14.43□□□□□ -0.1
SEC13-208ENST00000397109 SLC4A1P02730 911 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 GPR89BP0CG08 455 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 BPIP17213 487 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 SPIDRQ14159 915 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 HLTFQ14527 1009 aaKnown RBP eCLIP14.43□□□□□ -0.1
SEC13-208ENST00000397109 LONRF2Q1L5Z9 754 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 ISXQ2M1V0 245 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 CERCAMQ5T4B2 595 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 ALS2CLQ60I27 953 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 MARK2Q7KZI7 788 aaKnown RBP14.43□□□□□ -0.1
SEC13-208ENST00000397109 IFT20Q8IY31 132 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 SLC25A41Q8N5S1 370 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 SLC35B2Q8TB61 432 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 PTCD2Q8WV60 388 aaKnown RBP14.43□□□□□ -0.1
SEC13-208ENST00000397109 FAM118BQ9BPY3 351 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 LRRC1Q9BTT6 524 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 SPATS2LQ9NUQ6 558 aaKnown RBP14.43□□□□□ -0.1
SEC13-208ENST00000397109 ZNHIT2Q9UHR6 403 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 SPO11Q9Y5K1 396 aa14.43□□□□□ -0.1
SEC13-208ENST00000397109 OAS3Q9Y6K5 1087 aaKnown RBP14.43□□□□□ -0.1
SEC13-208ENST00000397109 C5orf60A6NFR6 353 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 TAF4O00268 1085 aa14.42□□□□□ -0.1
SEC13-208ENST00000397109 NTN3O00634 580 aaPredicted RBP14.42□□□□□ -0.1
SEC13-208ENST00000397109 DNAJC6O75061 913 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms