RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 STOML2Q9UJZ1 356 aa7.16□□□□□ -1.26
UPF2-203ENST00000397053 SYNPO2Q9UMS6 1093 aa7.16□□□□□ -1.26
UPF2-203ENST00000397053 MED31Q9Y3C7 131 aa7.16□□□□□ -1.26
UPF2-203ENST00000397053 KDM6BO15054 1643 aa7.16□□□□□ -1.26
UPF2-203ENST00000397053 A0A1B0GVM2 712 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 TCAF2A6NFQ2 919 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 YDJCA8MPS7 323 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 TISP43B9A030 160 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 AKAP8O43823 692 aaKnown RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 OR1I1O60431 355 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 PLOD3O60568 738 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 ZSCAN5DPP0CG00 497 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 FGFR3P22607 806 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 ATP5A1P25705 553 aaKnown RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 VLDLRP98155 873 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 RIPK1Q13546 671 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 FAM153CQ494X1 144 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 METTL21CQ5VZV1 264 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 LINGO4Q6UY18 593 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 AMIGO1Q86WK6 493 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 ZFPM1Q8IX07 1006 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 PLA2G15Q8NCC3 412 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 SLC38A4Q969I6 547 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 MARK4Q96L34 752 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 FAM129BQ96TA1 746 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 TRIM39Q9HCM9 518 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 GRIP1Q9Y3R0 1128 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 CASKO14936 926 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 B4GALT5O43286 388 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 NOS1APO75052 506 aaPredicted RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 ZNF432O94892 652 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 GLI1P08151 1106 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 PIM1P11309 404 aaPredicted RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 CPN2P22792 545 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 GNPDA1P46926 289 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 PDGFRLQ15198 375 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 QPRTQ15274 297 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 NRF1Q16656 503 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 PARP15Q460N3 678 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 ALG10Q5BKT4 473 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 RFWD3Q6PCD5 774 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 SLC34A3Q8N130 599 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 IL22RA1Q8N6P7 574 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 OR2L3Q8NG85 312 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 CKAP2Q8WWK9 683 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 SHC3Q92529 594 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 BAP1Q92560 729 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 ZNF75CPQ92670 426 aaPredicted RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 ART5Q96L15 291 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 BTBD10Q9BSF8 475 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 TRMT61BQ9BVS5 477 aaKnown RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 AGO3Q9H9G7 860 aaKnown RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 ANKHQ9HCJ1 492 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 CHST7Q9NS84 486 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 DDX20Q9UHI6 824 aaKnown RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 ZNF222Q9UK12 451 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 GRIN2DO15399 1336 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 SALL1Q9NSC2 1324 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 A0A075B6Q4 140 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 IRGMA1A4Y4 181 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 BTBD19C9JJ37 291 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 HDAC3O15379 428 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 NDST3O95803 873 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 LINC00032P0C843 101 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 TACR2P21452 398 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 CTSKP43235 329 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 SLC12A3P55017 1021 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 PSME3P61289 254 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 LSM3P62310 102 aaKnown RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 ABATP80404 500 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 NRG1Q02297 640 aaPredicted RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 FCHO2Q0JRZ9 810 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 TRAP1Q12931 704 aaKnown RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 SNAPC1Q16533 368 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 MAPK14Q16539 360 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 EML3Q32P44 896 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 GXYLT1Q4G148 440 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 TOR1AIP1Q5JTV8 583 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 UBE2J2Q8N2K1 259 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 FBXW8Q8N3Y1 598 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 C12orf29Q8N999 325 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 BHLHE22Q8NFJ8 381 aaPredicted RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 CLHC1Q8NHS4 586 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 EMID1Q96A84 441 aaPredicted RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 FAM163AQ96GL9 167 aaPredicted RBP7.15□□□□□ -1.26
UPF2-203ENST00000397053 C12orf66Q96MD2 445 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 ZSWIM3Q96MP5 696 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 GLOD4Q9HC38 313 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 MIOSQ9NXC5 875 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 CALML5Q9NZT1 146 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 MAFFQ9ULX9 164 aa7.15□□□□□ -1.26
UPF2-203ENST00000397053 B4DGG1 531 aa7.15□□□□□ -1.27
UPF2-203ENST00000397053 DDX3XO00571 662 aaKnown RBP eCLIP7.15□□□□□ -1.27
UPF2-203ENST00000397053 SNAP91O60641 907 aa7.15□□□□□ -1.27
UPF2-203ENST00000397053 TRAPPC6AO75865 159 aa7.15□□□□□ -1.27
UPF2-203ENST00000397053 SEC24AO95486 1093 aa7.15□□□□□ -1.27
UPF2-203ENST00000397053 APOC1P02654 83 aa7.15□□□□□ -1.27
UPF2-203ENST00000397053 CDK9P50750 372 aaKnown RBP7.15□□□□□ -1.27
UPF2-203ENST00000397053 DDR1Q08345 913 aa7.15□□□□□ -1.27
UPF2-203ENST00000397053 CARTPTQ16568 116 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms