RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 NBEAQ8NFP9 2946 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 TRBV23OR9-2A0A075B6M9 112 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 A0A1W2PNU3 283 aaPredicted RBP13.61□□□□□ -0.23
CXCL12-205ENST00000395794 BTNL10A8MVZ5 291 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 CDRT15L2A8MXV6 281 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 GOLGA6L6A8MZA4 724 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 APOC4-APOC2K7ER74 178 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 GRID2O43424 1007 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 B4GAT1O43505 415 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 DNAJC6O75061 913 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 APOC2P02655 101 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 ACP5P13686 325 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 FECHP22830 423 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 CXADRP78310 365 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 ZFP36L1Q07352 338 aaKnown RBP13.61□□□□□ -0.23
CXCL12-205ENST00000395794 NR1D2Q14995 579 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 ZDHHC20Q5W0Z9 365 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 ITPRIPL1Q6GPH6 555 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 GPR155Q7Z3F1 870 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 CLEC14AQ86T13 490 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 ZNF567Q8N184 647 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 AVL9Q8NBF6 648 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 GPR26Q8NDV2 337 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 PATE1Q8WXA2 126 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 GLYATL1Q969I3 302 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 SH3KBP1Q96B97 665 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 CRELD1Q96HD1 420 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 PRR11Q96HE9 360 aaPredicted RBP13.61□□□□□ -0.23
CXCL12-205ENST00000395794 DPYSL5Q9BPU6 564 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 OR2AG1Q9H205 316 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 PRORYQ9H606 182 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 RDH14Q9HBH5 336 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 HACD3Q9P035 362 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 NFKBIL1Q9UBC1 381 aaPredicted RBP13.61□□□□□ -0.23
CXCL12-205ENST00000395794 PISDQ9UG56 409 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 EFR3BQ9Y2G0 817 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 ST14Q9Y5Y6 855 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 OAS3Q9Y6K5 1087 aaKnown RBP13.61□□□□□ -0.23
CXCL12-205ENST00000395794 FAM208BQ5VWN6 2430 aa13.61□□□□□ -0.23
CXCL12-205ENST00000395794 LOC285095A0A1B0GVY8 99 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 PMS2P1A4D2B8 440 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 F5H423 210 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-205ENST00000395794 AGRPO00253 132 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 NUAK1O60285 661 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 SNX2O60749 519 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 ZNF189O75820 626 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-205ENST00000395794 ANXA9O76027 345 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 TJP3O95049 919 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 BPIP17213 487 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 HLA-DPA1P20036 260 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 CD68P34810 354 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-205ENST00000395794 VAV2P52735 878 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 GPLD1P80108 840 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 KIF5AQ12840 1032 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 MPP3Q13368 585 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 PRPSAP1Q14558 356 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 SIRPB2Q5JXA9 342 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 TMEM164Q5U3C3 297 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 RAD9BQ6WBX8 426 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 SLC9B2Q86UD5 537 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 CDKL3Q8IVW4 592 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-205ENST00000395794 SYCE1Q8N0S2 351 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 SLC25A41Q8N5S1 370 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 UBL4BQ8N7F7 174 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 IPMKQ8NFU5 416 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 OR10G6Q8NH81 332 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 GDAP1Q8TB36 358 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 LRRC45Q96CN5 670 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 EID2BQ96D98 161 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 TTC25Q96NG3 672 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 PLEKHG4BQ96PX9 1271 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 UBL7Q96S82 380 aaPredicted RBP13.6□□□□□ -0.23
CXCL12-205ENST00000395794 HERPUD2Q9BSE4 406 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 OSBPL8Q9BZF1 889 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 SEMA6CQ9H3T2 930 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.6□□□□□ -0.23
CXCL12-205ENST00000395794 IMPACTQ9P2X3 320 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 ATXN10Q9UBB4 475 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 KCNK6Q9Y257 313 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 PCDHGA7Q9Y5G6 932 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 SPO11Q9Y5K1 396 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 DUSP10Q9Y6W6 482 aa13.6□□□□□ -0.23
CXCL12-205ENST00000395794 TEX51A0A1B0GUA7 166 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 RCCD1A6NED2 376 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 GOLGA6L9A6NEM1 432 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 OR5K4A6NMS3 321 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 PPM1DO15297 605 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 VEGFDO43915 354 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 HGFP14210 728 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 ZNF8P17098 575 aaPredicted RBP13.59□□□□□ -0.23
CXCL12-205ENST00000395794 RBL1P28749 1068 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 CD1CP29017 333 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 SLC5A2P31639 672 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 PTPN7P35236 360 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 HMGCLP35914 325 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 FASLGP48023 281 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 GEMP55040 296 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 EIF3EP60228 445 aaKnown RBP13.59□□□□□ -0.23
CXCL12-205ENST00000395794 HHEXQ03014 270 aa13.59□□□□□ -0.23
CXCL12-205ENST00000395794 GTF2H3Q13889 308 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms