RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 DNAJC3Q13217 504 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 DHX34Q14147 1143 aaKnown RBP16.4■□□□□ 0.22
CXCL1-201ENST00000395761 KCNJ11Q14654 390 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 ELOCQ15369 112 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 PROX2Q3B8N5 592 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 KHDC1Q4VXA5 237 aaKnown RBP16.4■□□□□ 0.22
CXCL1-201ENST00000395761 N4BP2L1Q5TBK1 243 aaPredicted RBP16.4■□□□□ 0.22
CXCL1-201ENST00000395761 PDPK2PQ6A1A2 396 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 SYDE1Q6ZW31 735 aaPredicted RBP16.4■□□□□ 0.22
CXCL1-201ENST00000395761 FSTL5Q8N475 847 aaPredicted RBP16.4■□□□□ 0.22
CXCL1-201ENST00000395761 ZNF398Q8TD17 642 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 DTX3LQ8TDB6 740 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 CNDP2Q96KP4 475 aaKnown RBP16.4■□□□□ 0.22
CXCL1-201ENST00000395761 KRT12Q99456 494 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 OR2AG1Q9H205 316 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 ATXN10Q9UBB4 475 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 FTSJ1Q9UET6 329 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 PRKAB1Q9Y478 270 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 ST14Q9Y5Y6 855 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 PCNX2A6NKB5 2137 aa16.4■□□□□ 0.22
CXCL1-201ENST00000395761 ARID1BQ8NFD5 2236 aaPredicted RBP16.39■□□□□ 0.22
CXCL1-201ENST00000395761 FAM187AA6NFU0 413 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 MROH6A6NGR9 719 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 TNFSF14O43557 240 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 PRAMEF1O95521 474 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 GAS8O95995 478 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 ANXA6P08133 673 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 ZNF8P17098 575 aaPredicted RBP16.39■□□□□ 0.21
CXCL1-201ENST00000395761 TPSB2P20231 275 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 ADCY8P40145 1251 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 MAGEA6P43360 314 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 SESN2P58004 480 aaPredicted RBP16.39■□□□□ 0.21
CXCL1-201ENST00000395761 TUBB4BP68371 445 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 PEX6Q13608 980 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 TPSAB1Q15661 275 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 PYCR3Q53H96 274 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 ZNF534Q76KX8 674 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 MAATS1Q7Z4T9 603 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 TAF8Q7Z7C8 310 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 ADGRG6Q86SQ4 1221 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 GLRX5Q86SX6 157 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 SLCO6A1Q86UG4 719 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 NRROSQ86YC3 692 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 CPT1BQ92523 772 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 VPS35Q96QK1 796 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 FAM96AQ9H5X1 160 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 TRIM39Q9HCM9 518 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 NLE1Q9NVX2 485 aaPredicted RBP16.39■□□□□ 0.21
CXCL1-201ENST00000395761 TOR4AQ9NXH8 423 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 VPS18Q9P253 973 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 ZNHIT2Q9UHR6 403 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 GPSM3Q9Y4H4 160 aa16.39■□□□□ 0.21
CXCL1-201ENST00000395761 LY6G6EA0A0G2JKS1 128 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 TPP1O14773 563 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 SRP72O76094 671 aaKnown RBP16.38■□□□□ 0.21
CXCL1-201ENST00000395761 AK4P27144 223 aaPredicted RBP16.38■□□□□ 0.21
CXCL1-201ENST00000395761 ARSDP51689 593 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 CRADDP78560 199 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 PPP1R7Q15435 360 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 GLE1Q53GS7 698 aaKnown RBP16.38■□□□□ 0.21
CXCL1-201ENST00000395761 LRRC8BQ6P9F7 803 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 PHYKPLQ8IUZ5 450 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 GDAP1Q8TB36 358 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 GPBAR1Q8TDU6 330 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 CDKN2AIPNLQ96HQ2 116 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 APOLD1Q96LR9 279 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 ZNF778Q96MU6 729 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 DUSP23Q9BVJ7 150 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 ASB8Q9H765 288 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 TRNAU1APQ9NX07 287 aaKnown RBP16.38■□□□□ 0.21
CXCL1-201ENST00000395761 SLC2A6Q9UGQ3 507 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 DOLKQ9UPQ8 538 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 U3KQA8 63 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 MYLKQ15746 1914 aa16.38■□□□□ 0.21
CXCL1-201ENST00000395761 NUAK1O60285 661 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 AVILO75366 819 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 TMEM63AO94886 807 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 SLU7O95391 586 aaKnown RBP16.37■□□□□ 0.21
CXCL1-201ENST00000395761 FTH1P19P0C7X4 201 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 ALPPL2P10696 532 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 ADRA1DP25100 572 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 PSMA3P25788 255 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 MC4RP32245 332 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 HADHAP40939 763 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 CDKN1CP49918 316 aaPredicted RBP16.37■□□□□ 0.21
CXCL1-201ENST00000395761 CDK16Q00536 496 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 CTBSQ01459 385 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 DR1Q01658 176 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 ITGA9Q13797 1035 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 PTK6Q13882 451 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 GPRC6AQ5T6X5 926 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 LVRNQ6Q4G3 990 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 GKN2Q86XP6 184 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 GALNT13Q8IUC8 556 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 SFTPA2Q8IWL1 248 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 PNPLA1Q8N8W4 532 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 FAM181AQ8N9Y4 354 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 NOA1Q8NC60 698 aaKnown RBP16.37■□□□□ 0.21
CXCL1-201ENST00000395761 STYXQ8WUJ0 223 aa16.37■□□□□ 0.21
CXCL1-201ENST00000395761 OR2M4Q96R27 311 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms