RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 CD38P28907 300 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 PDIA3P30101 505 aaKnown RBP5.56□□□□□ -1.52
AP3S1-202ENST00000395548 NMT1P30419 496 aaKnown RBP5.56□□□□□ -1.52
AP3S1-202ENST00000395548 SSTR2P30874 369 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 ATICP31939 592 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 QARSP47897 775 aaKnown RBP5.56□□□□□ -1.52
AP3S1-202ENST00000395548 ALDH9A1P49189 494 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 MBTD1Q05BQ5 628 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 PPP3CAQ08209 521 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 SMARCB1Q12824 385 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 TP53BP2Q13625 1128 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 UGCGQ16739 394 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 ZACNQ401N2 412 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 FUT11Q495W5 492 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 ZRANB3Q5FWF4 1079 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 CFAP58Q5T655 872 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 NEK10Q6ZWH5 1172 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 DSG4Q86SJ6 1040 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 TMEM150AQ86TG1 271 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 CDR2LQ86X02 465 aaPredicted RBP5.56□□□□□ -1.52
AP3S1-202ENST00000395548 TMTC1Q8IUR5 882 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 LIX1LQ8IVB5 337 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 NDUFAF2Q8N183 169 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 FBXO39Q8N4B4 442 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 ATG16L2Q8NAA4 619 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 CHDHQ8NE62 594 aaPredicted RBP5.56□□□□□ -1.52
AP3S1-202ENST00000395548 FBXO18Q8NFZ0 1043 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 OR4C6Q8NH72 309 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 C2orf15Q8WU43 125 aaKnown RBP5.56□□□□□ -1.52
AP3S1-202ENST00000395548 UCMAQ8WVF2 138 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 SLC9A6Q92581 669 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 HOXB13Q92826 284 aaPredicted RBP5.56□□□□□ -1.52
AP3S1-202ENST00000395548 HVCN1Q96D96 273 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 ZMAT2Q96NC0 199 aaKnown RBP5.56□□□□□ -1.52
AP3S1-202ENST00000395548 SH2D3AQ9BRG2 576 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 LZTS2Q9BRK4 669 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 FAM167BQ9BTA0 163 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 SORBS1Q9BX66 1292 aaKnown RBP5.56□□□□□ -1.52
AP3S1-202ENST00000395548 NFKBIZQ9BYH8 718 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 GLT8D2Q9H1C3 349 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 OLA1Q9NTK5 396 aaKnown RBP5.56□□□□□ -1.52
AP3S1-202ENST00000395548 LRFN1Q9P244 771 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 TBC1D14Q9P2M4 693 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 TP53TG5Q9Y2B4 290 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 RAD54BQ9Y620 910 aa5.56□□□□□ -1.52
AP3S1-202ENST00000395548 EPN1Q9Y6I3 576 aaPredicted RBP5.56□□□□□ -1.52
AP3S1-202ENST00000395548 ZNF638Q14966 1978 aaKnown RBP5.56□□□□□ -1.52
AP3S1-202ENST00000395548 MYO18AQ92614 2054 aaKnown RBP5.55□□□□□ -1.52
AP3S1-202ENST00000395548 MAP1AP78559 2803 aaPredicted RBP5.55□□□□□ -1.52
AP3S1-202ENST00000395548 IGLV3-22A0A075B6J6 115 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 TCP11X1B4DZS4 312 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 FAM86B1E9PN63 330 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 TRIM38O00635 465 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 TULP3O75386 442 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 SPDEFO95238 335 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 SIX3O95343 332 aaPredicted RBP5.55□□□□□ -1.52
AP3S1-202ENST00000395548 TBX18O95935 607 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 HNRNPCP07910 306 aaKnown RBP eCLIP5.55□□□□□ -1.52
AP3S1-202ENST00000395548 FAM86B2P0C5J1 330 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 OR4Q2P0C623 313 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 EGR2P11161 476 aaPredicted RBP5.55□□□□□ -1.52
AP3S1-202ENST00000395548 RARGP13631 454 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 ATP1A3P13637 1013 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 ATF6P18850 670 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 HDCP19113 662 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 WT1P19544 449 aaPredicted RBP5.55□□□□□ -1.52
AP3S1-202ENST00000395548 GALNSP34059 522 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 UBA7P41226 1012 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 HSPA7P48741 367 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 SEC24CP53992 1094 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 TSPY1Q01534 308 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 SLFN5Q08AF3 891 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 MGAT2Q10469 447 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 DMP1Q13316 513 aaPredicted RBP5.55□□□□□ -1.52
AP3S1-202ENST00000395548 PSMD6Q15008 389 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 PFKFB4Q16877 469 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 GLRA4Q5JXX5 417 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 RHBDF2Q6PJF5 856 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 ASB18Q6ZVZ8 466 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 PRIMA1Q86XR5 153 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 TMEM132CQ8N3T6 1108 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 ADAMTS18Q8TE60 1221 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 STON2Q8WXE9 905 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 ASB12Q8WXK4 309 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 FRAT1Q92837 279 aaPredicted RBP5.55□□□□□ -1.52
AP3S1-202ENST00000395548 OTUB2Q96DC9 234 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 NT5C1BQ96P26 610 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 CYP2S1Q96SQ9 504 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 ACOX2Q99424 681 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 RIT2Q99578 217 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 STRADBQ9C0K7 418 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 DHX33Q9H6R0 707 aaKnown RBP5.55□□□□□ -1.52
AP3S1-202ENST00000395548 TTC12Q9H892 705 aaPredicted RBP5.55□□□□□ -1.52
AP3S1-202ENST00000395548 MRGBPQ9NV56 204 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 NSMCE4AQ9NXX6 385 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 NCKIPSDQ9NZQ3 722 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 SIK3Q9Y2K2 1263 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 GDAQ9Y2T3 454 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 NOTCH1P46531 2555 aa5.55□□□□□ -1.52
AP3S1-202ENST00000395548 SMIM28A0A1B0GU29 152 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms