RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 PCDHGA6Q9Y5G7 932 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 SLC30A1Q9Y6M5 507 aa15.64■□□□□ 0.09
SNCA-205ENST00000394991 ANKRD17O75179 2603 aaKnown RBP15.64■□□□□ 0.09
SNCA-205ENST00000394991 A0A0J9YYE9 177 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 PIPSLA2A3N6 862 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 FADS2P1A8MWK0 482 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 SORBS2O94875 1100 aaKnown RBP15.63■□□□□ 0.09
SNCA-205ENST00000394991 TRBC1P01850 177 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 ZNF30P17039 623 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 TYRP1P17643 537 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 COL8A1P27658 744 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 MMP13P45452 471 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 LEPRP48357 1165 aaKnown RBP15.63■□□□□ 0.09
SNCA-205ENST00000394991 CDKAL1Q5VV42 579 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 CPZQ66K79 652 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 PLEKHA7Q6IQ23 1121 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 RASGRP3Q8IV61 690 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 TGM7Q96PF1 710 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 CLSTN2Q9H4D0 955 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 ZNF768Q9H5H4 540 aaKnown RBP15.63■□□□□ 0.09
SNCA-205ENST00000394991 CUEDC1Q9NWM3 386 aaPredicted RBP15.63■□□□□ 0.09
SNCA-205ENST00000394991 SCHIP1Q9P0W5 487 aaPredicted RBP15.63■□□□□ 0.09
SNCA-205ENST00000394991 LNPEPQ9UIQ6 1025 aa15.63■□□□□ 0.09
SNCA-205ENST00000394991 PRPSAP2O60256 369 aa15.62■□□□□ 0.09
SNCA-205ENST00000394991 LRCH4O75427 683 aa15.62■□□□□ 0.09
SNCA-205ENST00000394991 SPAG6O75602 509 aa15.62■□□□□ 0.09
SNCA-205ENST00000394991 TIAF1O95411 115 aa15.62■□□□□ 0.09
SNCA-205ENST00000394991 FGF5P12034 268 aa15.62■□□□□ 0.09
SNCA-205ENST00000394991 SLC2A4P14672 509 aa15.62■□□□□ 0.09
SNCA-205ENST00000394991 GARSP41250 739 aaKnown RBP15.62■□□□□ 0.09
SNCA-205ENST00000394991 ZNF135P52742 658 aaPredicted RBP15.62■□□□□ 0.09
SNCA-205ENST00000394991 IL11RAQ14626 422 aa15.62■□□□□ 0.09
SNCA-205ENST00000394991 PRR30Q53SZ7 412 aaPredicted RBP15.62■□□□□ 0.09
SNCA-205ENST00000394991 PSTKQ8IV42 348 aaKnown RBP15.62■□□□□ 0.09
SNCA-205ENST00000394991 BBS5Q8N3I7 341 aa15.62■□□□□ 0.09
SNCA-205ENST00000394991 SYT11Q9BT88 431 aa15.62■□□□□ 0.09
SNCA-205ENST00000394991 NT5MQ9NPB1 228 aa15.62■□□□□ 0.09
SNCA-205ENST00000394991 TMEM191CA6NGB0 347 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 OR5K4A6NMS3 321 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 H3BRJ5 948 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 KIF1CO43896 1103 aaKnown RBP15.61■□□□□ 0.09
SNCA-205ENST00000394991 RNF8O76064 485 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 CLDN7O95471 211 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 RECKO95980 971 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 IL1R2P27930 398 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 CASP14P31944 242 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 CHAF1BQ13112 559 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 FKBP15Q5T1M5 1219 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 HENMT1Q5T8I9 393 aaKnown RBP15.61■□□□□ 0.09
SNCA-205ENST00000394991 MARC1Q5VT66 337 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 TMCO3Q6UWJ1 677 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 TMEM26Q6ZUK4 368 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 ATPAF2Q8N5M1 289 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 BRD8Q9H0E9 1235 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 ACTL8Q9H568 366 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 ZWILCHQ9H900 591 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 RMI1Q9H9A7 625 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 UCK1Q9HA47 277 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 MLXIPLQ9NP71 852 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 LHX9Q9NQ69 397 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 CASS4Q9NQ75 786 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 PARVAQ9NVD7 372 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 PADI1Q9ULC6 663 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 ADGRG1Q9Y653 693 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 SPTBP11277 2137 aa15.61■□□□□ 0.09
SNCA-205ENST00000394991 TMCO5BA8MYB1 307 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 TOX3O15405 576 aaPredicted RBP15.6■□□□□ 0.09
SNCA-205ENST00000394991 GRID2O43424 1007 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 NUAK1O60285 661 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 UBXN7O94888 489 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 PRLP01236 227 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 TCF4P15884 667 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 DCTP40126 519 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 SLC19A1P41440 591 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 CLCNKAP51800 687 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 PGDP52209 483 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 CDH6P55285 790 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 RPS18P62269 152 aaKnown RBP15.6■□□□□ 0.09
SNCA-205ENST00000394991 MRPL49Q13405 166 aaKnown RBP15.6■□□□□ 0.09
SNCA-205ENST00000394991 LAMB3Q13751 1172 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 DPYSL2Q16555 572 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 SMTNL2Q2TAL5 461 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.6■□□□□ 0.09
SNCA-205ENST00000394991 ZNF648Q5T619 568 aaPredicted RBP15.6■□□□□ 0.09
SNCA-205ENST00000394991 PRSS42Q7Z5A4 293 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 POLNQ7Z5Q5 900 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 NDUFAF2Q8N183 169 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 TEX26Q8N6G2 289 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 AVL9Q8NBF6 648 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 NEK11Q8NG66 645 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 RSC1A1Q92681 617 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 GBP4Q96PP9 640 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 CSPG4P5Q96PW8 444 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 TDRD1Q9BXT4 1180 aaKnown RBP15.6■□□□□ 0.09
SNCA-205ENST00000394991 AKIRIN1Q9H9L7 192 aaPredicted RBP15.6■□□□□ 0.09
SNCA-205ENST00000394991 ARFGAP3Q9NP61 516 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 ZNF624Q9P2J8 865 aaPredicted RBP15.6■□□□□ 0.09
SNCA-205ENST00000394991 ATXN10Q9UBB4 475 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 CHKBQ9Y259 395 aa15.6■□□□□ 0.09
SNCA-205ENST00000394991 TCP11X1B4DZS4 312 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms