RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 BHMTQ93088 406 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 GIMAP2Q9UG22 337 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 AGO1Q9UL18 857 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 A0A1B0GVG6 124 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 TTC36A6NLP5 189 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 KERAO60938 352 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 OR4F21O95013 312 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 JUNP05412 331 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 C1QTNF8P60827 252 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 CDKL1Q00532 357 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 ELAVL2Q12926 359 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 TAF10Q12962 218 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 AP5B1Q2VPB7 878 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 INTS11Q5TA45 600 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 PPP4R4Q6NUP7 873 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 CIR1Q86X95 450 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 CFAP52Q8N1V2 620 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 VPS37AQ8NEZ2 397 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 ZFP14Q9HCL3 533 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 CCM2LQ9NUG4 571 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 LSM7Q9UK45 103 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 TMEM88BA6NKF7 163 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 G3V2T6 193 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 ULK1O75385 1050 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 DGKAP23743 735 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 S100A5P33763 92 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 PIK3CGP48736 1102 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 MAPKAPK2P49137 400 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 ERVK-8P63133 956 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 GRB14Q14449 540 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 GCNT7Q6ZNI0 430 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 SVOPQ8N4V2 548 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 LINC01465Q8N7H1 131 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 BPIFB6Q8NFQ5 453 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 NPLOC4Q8TAT6 608 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 NT5C3BQ969T7 300 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 SLC45A3Q96JT2 553 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 GLT1D1Q96MS3 346 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 RIBC2Q9H4K1 309 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 EIF2B4Q9UI10 523 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 PCDHB7Q9Y5E2 793 aa11.59□□□□□ -0.55
UBE2D3-209ENST00000394804 A0A1W2PP18 115 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 TTC24A2A3L6 582 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 ZNF195O14628 629 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 ZNF197O14709 1029 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 APOA1P02647 267 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 ALDH2P05091 517 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 C8BP07358 591 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 MTHFRP42898 656 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 GALNT1Q10472 559 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 ITGA7Q13683 1181 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 TRIP4Q15650 581 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 MAMDC4Q6UXC1 1216 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 RANBP10Q6VN20 620 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 ATAD1Q8NBU5 361 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 APOL4Q9BPW4 351 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 LRRC3Q9BY71 257 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 UBAP1Q9NZ09 502 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 KCTD3Q9Y597 815 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 FAM234BA2RU67 622 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 UNC50Q53HI1 259 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 C14orf80Q86SX3 495 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 CNTN4Q8IWV2 1026 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 ANKFN1Q8N957 763 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 ESAMQ96AP7 390 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 IMP4Q96G21 291 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 AARSD1Q9BTE6 412 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 IGSF5Q9NSI5 407 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 USE1Q9NZ43 259 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 ADGRE2Q9UHX3 823 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 PCDHB8Q9UN66 801 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 DOCK5Q9H7D0 1870 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 RBM47A0AV96 593 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 TACR2P21452 398 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 TRPC1P48995 793 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 DDX39BQ13838 428 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 RFX4Q33E94 735 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 ARMC12Q5T9G4 340 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 PCSK9Q8NBP7 692 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 OR7A2PQ8NGA2 310 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 PPP1R14BQ96C90 147 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 CDKN2AIPNLQ96HQ2 116 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 TMEM209Q96SK2 561 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 YTHDF1Q9BYJ9 559 aaKnown RBP11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.58□□□□□ -0.568e-9■■□□□ 13.6
UBE2D3-209ENST00000394804 DNMT3LQ9UJW3 386 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 SLC27A5Q9Y2P5 690 aa11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 ARIH1Q9Y4X5 557 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-209ENST00000394804 SLC28A1O00337 649 aa11.57□□□□□ -0.56
UBE2D3-209ENST00000394804 IFRD1O00458 451 aaPredicted RBP11.57□□□□□ -0.56
UBE2D3-209ENST00000394804 PRMT5O14744 637 aaPredicted RBP11.57□□□□□ -0.56
UBE2D3-209ENST00000394804 AURKAO14965 403 aa11.57□□□□□ -0.56
UBE2D3-209ENST00000394804 ECI2O75521 394 aa11.57□□□□□ -0.56
UBE2D3-209ENST00000394804 CDK14O94921 469 aa11.57□□□□□ -0.56
UBE2D3-209ENST00000394804 CES1P23141 567 aa11.57□□□□□ -0.56
UBE2D3-209ENST00000394804 TPP2P29144 1249 aaPredicted RBP11.57□□□□□ -0.56
UBE2D3-209ENST00000394804 ARRB2P32121 409 aa11.57□□□□□ -0.56
UBE2D3-209ENST00000394804 GRK4P32298 578 aa11.57□□□□□ -0.56
UBE2D3-209ENST00000394804 DGUOKQ16854 277 aa11.57□□□□□ -0.56
UBE2D3-209ENST00000394804 SPATS1Q496A3 300 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms