RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 WEE1P30291 646 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 NDST2P52849 883 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 PSME3P61289 254 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CRADDP78560 199 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 HERC3Q15034 1050 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 SKIV2LQ15477 1246 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 XKR4Q5GH76 650 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 SAMD4BQ5PRF9 694 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 FNBP1LQ5T0N5 605 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 SLC9A4Q6AI14 798 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 UGT3A1Q6NUS8 523 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 C16orf62Q7Z3J2 963 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 ZNF567Q8N184 647 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 OR10T2Q8NGX3 314 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 ZNF461Q8TAF7 563 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 FIG4Q92562 907 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 EGFL8Q99944 293 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 APOL4Q9BPW4 351 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 GPR62Q9BZJ7 368 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CCSER2Q9H7U1 834 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 DIABLOQ9NR28 239 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 ZDHHC7Q9NXF8 308 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CRLS1Q9UJA2 301 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 KRT87PA6NCN2 255 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 TRPC5OSA6NMA1 111 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 SCAMP3O14828 347 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 PRKD3O94806 890 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 TBX18O95935 607 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 IGSF6O95976 241 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 SOD2P04179 222 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 BPGMP07738 259 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CHRNB1P11230 501 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CDH1P12830 882 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CKMT2P17540 419 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 PIK3R1P27986 724 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 SOX6P35712 828 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 KRT20P35900 424 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 GPR15P49685 360 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 RGS4P49798 205 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 MLLT6P55198 1093 aaPredicted RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 ABCE1P61221 599 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 IL5RAQ01344 420 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 BCL2L1Q07817 233 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 KLF1Q13351 362 aaPredicted RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 DSC3Q14574 896 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CYP51A1Q16850 503 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 PLEKHG4Q58EX7 1191 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CLLU1OSQ5K130 101 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 VWA5B1Q5TIE3 1220 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 ANKRD22Q5VYY1 191 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 NCBP2-AS2Q69YL0 99 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 ZCCHC8Q6NZY4 707 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 ADGRD1Q6QNK2 874 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 DNAJB7Q7Z6W7 309 aaPredicted RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 ARMC8Q8IUR7 673 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CBR4Q8N4T8 237 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 SLC15A4Q8N697 577 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 FAM156AQ8NDB6 213 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 TOR1AIP2Q8NFQ8 470 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 LILRB4Q8NHJ6 448 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 RP9Q8TA86 221 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 AZIN2Q96A70 460 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 PHF21AQ96BD5 680 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 PLD4Q96BZ4 506 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CLIP3Q96DZ5 547 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 ZHX1-C8orf76Q96EF9 292 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CERS2Q96G23 380 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 LENG8Q96PV6 779 aaPredicted RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 SLC2A13Q96QE2 648 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 PKP2Q99959 881 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 BDH2Q9BUT1 245 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 NUAK2Q9H093 628 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 SMOC2Q9H3U7 446 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 IGFLR1Q9H665 355 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 C8orf4Q9NR00 106 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CACNA2D2Q9NY47 1150 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CCDC167Q9P0B6 97 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 PADI4Q9UM07 663 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 VPS4AQ9UN37 437 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 PLLPQ9Y342 182 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 SCN4AP35499 1836 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 TCRBV9S1A1TA0A576 114 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CCDC182A6NF36 153 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 MRASO14807 208 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 AURKAO14965 403 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 COL6A2P12110 1019 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 CSF2RAP15509 400 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 AKT1P31749 480 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 MAPKAPK2P49137 400 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 BMXP51813 675 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 AFF1P51825 1210 aaKnown RBP5.66□□□□□ -1.5
RFFL-202ENST00000394597 CDH4P55283 916 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 WNT3AP56704 352 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 MAXP61244 160 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 PLIN5Q00G26 463 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 ARMC12Q5T9G4 340 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 TTC23LQ6PF05 361 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 UNC5AQ6ZN44 842 aa5.66□□□□□ -1.5
RFFL-202ENST00000394597 P3H2Q8IVL5 708 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms