RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 AARSD1Q9BTE6 412 aaKnown RBP13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 PCDHGC4Q9Y5F7 938 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 CEPT1Q9Y6K0 416 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 SLC38A8A6NNN8 435 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 NIPSNAP2O75323 286 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 RPP40O75818 363 aaKnown RBP13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 BAIAP3O94812 1187 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 OR1D2P34982 312 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 SCNN1BP51168 640 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 MAPRE2Q15555 327 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 SAMD4BQ5PRF9 694 aaKnown RBP13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 PSAPL1Q6NUJ1 521 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 ANKS3Q6ZW76 656 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 SYVN1Q86TM6 617 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 AFAP1L2Q8N4X5 818 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 SIDT2Q8NBJ9 832 aaKnown RBP13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 TSPAN14Q8NG11 270 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 OR2T34Q8NGX1 318 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 OR2T3Q8NH03 318 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 MRPL9Q9BYD2 267 aaKnown RBP13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 RNF208Q9H0X6 261 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 VCX3AQ9NNX9 186 aa13.4□□□□□ -0.26
GTF2F1-201ENST00000394456 SLC6A2P23975 617 aa13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 HOXD9P28356 352 aaPredicted RBP13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 ZFP36L2P47974 494 aaKnown RBP13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 HK3P52790 923 aa13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 STC1P52823 247 aa13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 UFM1P61960 85 aa13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 CLCQ05315 142 aa13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 TBCELQ5QJ74 424 aa13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 KANK2Q63ZY3 851 aa13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 FAM117BQ6P1L5 589 aa13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 TMEM126BQ8IUX1 230 aa13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 CMTR2Q8IYT2 770 aaKnown RBP13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 CCT7Q99832 543 aa13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 VN1R3Q9BXE9 311 aa13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 POLR1EQ9GZS1 481 aaKnown RBP13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 SLC52A3Q9NQ40 469 aa13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 SMOXQ9NWM0 555 aa13.4□□□□□ -0.27
GTF2F1-201ENST00000394456 PDE4DIPQ5VU43 2346 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 H7C4K7 107 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 PRAMEF11O60813 436 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 ASLP04424 464 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 ALDH7A1P49419 539 aaKnown RBP13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 IL10RBQ08334 325 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 ELAVL2Q12926 359 aaKnown RBP13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 PYCR3Q53H96 274 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 NHSL2Q5HYW2 709 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 LRRC43Q8N309 656 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 MIER2Q8N344 545 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 FIBCD1Q8N539 461 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 RMDN1Q96DB5 314 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 FBXL20Q96IG2 436 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 EPB41L1Q9H4G0 881 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 SARS2Q9NP81 518 aaKnown RBP13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 OLA1Q9NTK5 396 aaKnown RBP13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 ETAA1Q9NY74 926 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 RNF112Q9ULX5 631 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 HOXA2O43364 376 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 TACR2P21452 398 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 RPS6KA3P51812 740 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 TXNL4AP83876 142 aaKnown RBP13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 CTBSQ01459 385 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 ACVR1Q04771 509 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 GALNT1Q10472 559 aaPredicted RBP13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 ARHGEF6Q15052 776 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 MAP7D1Q3KQU3 841 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 LINGO4Q6UY18 593 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 B3GNT6Q6ZMB0 384 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 LRRC49Q8IUZ0 686 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 OFCC1Q8IZS5 231 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 EFHBQ8N7U6 833 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 WBP2Q969T9 261 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 HIC2Q96JB3 615 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 SPATA17Q96L03 361 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 TRIB3Q96RU7 358 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 PDFQ9HBH1 243 aa13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 INTS7Q9NVH2 962 aaKnown RBP13.39□□□□□ -0.27
GTF2F1-201ENST00000394456 DRGXA6NNA5 263 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 BTN3A1O00481 513 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 ANGPT2O15123 496 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 ARPC2O15144 300 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 FOXD2O60548 495 aaPredicted RBP13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 GJB5O95377 273 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 IL12AP29459 219 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 NFKB2Q00653 900 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 TRAP1Q12931 704 aaKnown RBP13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 LAMB3Q13751 1172 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 PTPRNQ16849 979 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 MRNIPQ6NTE8 343 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 FBXO39Q8N4B4 442 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 BRSK1Q8TDC3 778 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 FUBP1Q96AE4 644 aaKnown RBP13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 LRRC58Q96CX6 371 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 PLEKHG4BQ96PX9 1271 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 UHRF1Q96T88 793 aaPredicted RBP13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 TMEM175Q9BSA9 504 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 NACA2Q9H009 215 aa13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 PAK6Q9NQU5 681 aaPredicted RBP13.38□□□□□ -0.27
GTF2F1-201ENST00000394456 EIF2B4Q9UI10 523 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms