RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 SPASTQ9UBP0 616 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 APOBEC3BQ9UH17 382 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 CNOT6Q9ULM6 557 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 SLC17A4Q9Y2C5 497 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 FNDC3AQ9Y2H6 1198 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 UTP11Q9Y3A2 253 aaKnown RBP6.71□□□□□ -1.34
UBBP1-201ENST00000392399 TCAF1Q9Y4C2 921 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 MRFAP1Q9Y605 127 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 SLC30A1Q9Y6M5 507 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 PCDH15Q96QU1 1955 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 BPTFQ12830 3046 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 LRRK1Q38SD2 2015 aa6.71□□□□□ -1.34
UBBP1-201ENST00000392399 TCRBV7S3A2A0A539 114 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 PRSS38A1L453 326 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CTAGE15A4D2H0 777 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 KLHL33A6NCF5 533 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 FADS2P1A8MWK0 482 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 LMO7DNF2Z398 122 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 GAPDHSO14556 408 aaPredicted RBP6.7□□□□□ -1.34
UBBP1-201ENST00000392399 SCAMP1O15126 338 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 AQP9O43315 295 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 BUD23O43709 281 aaKnown RBP6.7□□□□□ -1.34
UBBP1-201ENST00000392399 NUAK1O60285 661 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 UGT1A9O60656 530 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 KCNJ13O60928 360 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CDK14O94921 469 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 SEC31AO94979 1220 aaKnown RBP6.7□□□□□ -1.34
UBBP1-201ENST00000392399 PRAMEF1O95521 474 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 ASMTLO95671 621 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 SLC4A1P02730 911 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CTAGE8P0CG41 777 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 RALBP11234 206 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 PAMP19021 973 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 UGT1A6P19224 532 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 ITGALP20701 1170 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 UGT1A1P22309 533 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 UGT1A4P22310 534 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 UGT1A3P35503 534 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 UGT1A5P35504 534 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 MAGEA3P43357 314 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 SESN2P58004 480 aaPredicted RBP6.7□□□□□ -1.34
UBBP1-201ENST00000392399 TUBB4BP68371 445 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 XIAPP98170 497 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CAV1Q03135 178 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 TMEM115Q12893 351 aaPredicted RBP6.7□□□□□ -1.34
UBBP1-201ENST00000392399 NFATC2Q13469 925 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 LRP8Q14114 963 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 SEPT6Q14141 434 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 PUM1Q14671 1186 aaKnown RBP eCLIP6.7□□□□□ -1.34
UBBP1-201ENST00000392399 SHBQ15464 509 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CHRNA6Q15825 494 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 RSPO4Q2I0M5 234 aaPredicted RBP6.7□□□□□ -1.34
UBBP1-201ENST00000392399 ALG11Q2TAA5 492 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 UAP1L1Q3KQV9 507 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 GLE1Q53GS7 698 aaKnown RBP6.7□□□□□ -1.34
UBBP1-201ENST00000392399 PRRT3Q5FWE3 981 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 TPRG1LQ5T0D9 272 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 C6orf132Q5T0Z8 1188 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 TSTD2Q5T7W7 516 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 LYPLAL1Q5VWZ2 237 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 ANKRD22Q5VYY1 191 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 IZUMO3Q5VZ72 239 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 ALS2CLQ60I27 953 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 FAM151BQ6UXP7 276 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CERS6Q6ZMG9 384 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 ZNF534Q76KX8 674 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 PIP4P1Q86T03 277 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CTAGE6Q86UF2 777 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CAND1Q86VP6 1230 aaKnown RBP6.7□□□□□ -1.34
UBBP1-201ENST00000392399 GKN2Q86XP6 184 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CCNJLQ8IV13 435 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 HID1Q8IV36 788 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CTAGE4Q8IX94 777 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 PHACTR4Q8IZ21 702 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 PDIK1LQ8N165 341 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 SLC25A45Q8N413 288 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 MMGT1Q8N4V1 131 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 DDHD1Q8NEL9 900 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 MYRIPQ8NFW9 859 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 GDAP1Q8TB36 358 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 RHBDD1Q8TEB9 315 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 OR1E3Q8WZA6 343 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.7□□□□□ -1.34
UBBP1-201ENST00000392399 TSACCQ96A04 125 aaPredicted RBP6.7□□□□□ -1.34
UBBP1-201ENST00000392399 LRRC39Q96DD0 335 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 SNF8Q96H20 258 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 SERPINB12Q96P63 405 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CDC6Q99741 560 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 NAT9Q9BTE0 207 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CARS2Q9HA77 564 aaKnown RBP6.7□□□□□ -1.34
UBBP1-201ENST00000392399 UGT1A7Q9HAW7 530 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 UGT1A10Q9HAW8 530 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 UGT1A8Q9HAW9 530 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 IL21RQ9HBE5 538 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CYP4F12Q9HCS2 524 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 FGF22Q9HCT0 170 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 CHRAC1Q9NRG0 131 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 PIH1D1Q9NWS0 290 aaKnown RBP6.7□□□□□ -1.34
UBBP1-201ENST00000392399 NCKIPSDQ9NZQ3 722 aa6.7□□□□□ -1.34
UBBP1-201ENST00000392399 SAMD15Q9P1V8 674 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms