RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 TSTQ16762 297 aaKnown RBP3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 PNLIPRP3Q17RR3 467 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 CCDC96Q2M329 555 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 OTUD3Q5T2D3 398 aaPredicted RBP3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 CCNYL2Q5T2Q4 361 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 PAPD4Q6PIY7 484 aaKnown RBP3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 CYP20A1Q6UW02 462 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 ZNF852Q6ZMS4 543 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 SEPT14Q6ZU15 432 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 KCTD8Q6ZWB6 473 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 PLEKHM3Q6ZWE6 761 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 TMTC3Q6ZXV5 915 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 ARHGAP12Q8IWW6 846 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 HACE1Q8IYU2 909 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 FRMD1Q8N878 549 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 HMGCLL1Q8TB92 370 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 LRRC8CQ8TDW0 803 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 ARHGEF2Q92974 986 aaKnown RBP3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 HCFC1R1Q9NWW0 138 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 IRAK4Q9NWZ3 460 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 STK39Q9UEW8 545 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 POLG2Q9UHN1 485 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 TCF19Q9Y242 345 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 KCNE2Q9Y6J6 123 aa3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 GREB1LQ9C091 1923 aaPredicted RBP3.5□□□□□ -1.85
SNORA40.3-201ENST00000390964 KANSL1LA0AUZ9 987 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 B4E171 279 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 FAM72CH0Y354 149 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 J3KRW8 73 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 SLC22A3O75751 556 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 EIF2S1P05198 315 aaKnown RBP3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 PAX1P15863 534 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 CDKN1AP38936 164 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 TSPAN7P41732 249 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 GLIPR1P48060 266 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 RPS3AP61247 264 aaKnown RBP3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 MPP1Q00013 466 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 TFAP4Q01664 338 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 RBM39Q14498 530 aaKnown RBP3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 CCDC6Q16204 474 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 KRTCAP3Q53RY4 240 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 ZNF805Q5CZA5 627 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 STXBP5Q5T5C0 1151 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 FAM72AQ5TYM5 149 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 FAM72DQ6L9T8 149 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 CCDC70Q6NSX1 233 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 SLC26A9Q7LBE3 791 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 CPLX4Q7Z7G2 160 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 FAM72BQ86X60 149 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 MAP7D3Q8IWC1 876 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 SLC24A4Q8NFF2 622 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 OR1J2Q8NGS2 313 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 TDRD7Q8NHU6 1098 aaKnown RBP3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 SLC38A5Q8WUX1 472 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 TMEM255BQ8WV15 326 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 SCRN2Q96FV2 425 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 POLR3CQ9BUI4 534 aaPredicted RBP3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 TMEM39BQ9GZU3 492 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 POLR1BQ9H9Y6 1135 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 TCP11L1Q9NUJ3 509 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 EHD2Q9NZN4 543 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 TAAR2Q9P1P5 351 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 COPG2Q9UBF2 871 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 ERRFI1Q9UJM3 462 aaPredicted RBP3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 CLIC4Q9Y696 253 aa3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 TDRD9Q8NDG6 1382 aaKnown RBP3.49□□□□□ -1.85
SNORA40.3-201ENST00000390964 FAM237BA0A1B0GVD1 139 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 A0A1W2PP11 408 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 DVL1O14640 695 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 ATP2A1O14983 1001 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 SCAMP1O15126 338 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 SYNGR3O43761 229 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 DDX58O95786 925 aaKnown RBP3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 TIMP3P35625 211 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 AMPHP49418 695 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 DVL1P1P54792 670 aaPredicted RBP3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 TAS2R40P59535 323 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 PLIN5Q00G26 463 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 RUNX1T1Q06455 604 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 PDE1CQ14123 709 aaPredicted RBP3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 NAB2Q15742 525 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 OR7E24Q6IFN5 339 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 FAM171BQ6P995 826 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 NCEH1Q6PIU2 408 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 GLDNQ6ZMI3 551 aaPredicted RBP3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 ATG9AQ7Z3C6 839 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 TSPAN33Q86UF1 283 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 FOXP4Q8IVH2 680 aaPredicted RBP3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 KCNG4Q8TDN1 519 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 SLC44A1Q8WWI5 657 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 ZNF583Q96ND8 569 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 DUX3Q96PT4 197 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 FAM118AQ9NWS6 357 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 MTMR10Q9NXD2 777 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 FBXW11Q9UKB1 542 aa3.48□□□□□ -1.85
SNORA40.3-201ENST00000390964 IGLV5-45A0A087WSX0 123 aa3.47□□□□□ -1.85
SNORA40.3-201ENST00000390964 OR5K3A6NET4 321 aa3.47□□□□□ -1.85
SNORA40.3-201ENST00000390964 EIF4E1BA6NMX2 242 aaKnown RBP3.47□□□□□ -1.85
SNORA40.3-201ENST00000390964 ANKRD66B4E2M5 251 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms